Factsheet for VIT_10s0003g03650.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 1
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03530.t01	Wine grape	cytosol	92.75	96.97
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	36.5	93.9
VIT_10s0003g03570.t01	Wine grape	cytosol	17.79	93.75
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	13.83	92.92
VIT_10s0003g03520.t01	Wine grape	cytosol	89.2	89.91
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	32.54	89.82
VIT_10s0003g03660.t01	Wine grape	cytosol	93.02	89.25
VIT_10s0003g03610.t01	Wine grape	cytosol	31.36	84.4
VIT_10s0003g03540.t01	Wine grape	cytosol	23.19	78.92
VIT_09s0054g01160.t01	Wine grape	extracellular	8.96	67.33
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.67	64.18
VIT_09s0054g01220.t01	Wine grape	cytosol	63.64	63.8
VIT_10s0003g03550.t01	Wine grape	extracellular	8.3	63.0
VIT_09s0054g01500.t01	Wine grape	cytosol	8.04	61.0
VIT_09s0054g01390.t01	Wine grape	cytosol	61.4	60.76
VIT_09s0054g01470.t01	Wine grape	cytosol	31.49	60.66
VIT_09s0054g01410.t01	Wine grape	cytosol	61.4	60.6
VIT_09s0054g01230.t01	Wine grape	cytosol	60.87	60.08
VIT_11s0065g00030.t01	Wine grape	cytosol	59.82	59.89
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	40.18	59.57
VIT_09s0054g01210.t01	Wine grape	cytosol	59.29	59.45
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.27	58.82
VIT_04s0008g03000.t01	Wine grape	cytosol	23.19	57.33
VIT_09s0054g01180.t01	Wine grape	cytosol	47.56	56.14
VIT_09s0054g01340.t01	Wine grape	cytosol	30.3	55.56
VIT_11s0065g00640.t01	Wine grape	cytosol	55.34	55.26
VIT_09s0018g00630.t01	Wine grape	cytosol	55.07	55.15
VIT_09s0054g01550.t01	Wine grape	cytosol	54.81	54.88
VIT_09s0054g01130.t01	Wine grape	cytosol	13.44	54.55
VIT_09s0054g01140.t01	Wine grape	extracellular	14.23	54.55
VIT_09s0054g01370.t01	Wine grape	cytosol	9.62	54.48
VIT_09s0054g01120.t01	Wine grape	cytosol	50.86	54.21
VIT_04s0008g02980.t01	Wine grape	mitochondrion	11.07	53.85
VIT_09s0054g01520.t01	Wine grape	cytosol	60.87	53.16
VIT_10s0116g01060.t01	Wine grape	cytosol	6.19	52.81
VIT_09s0054g01200.t01	Wine grape	cytosol	6.98	52.48
VIT_09s0054g01110.t01	Wine grape	cytosol	54.94	52.39
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	7.51	52.29
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	18.05	52.29
VIT_04s0008g02990.t01	Wine grape	cytosol	6.46	52.13
TraesCS4A01G495100.1	Wheat	cytosol	51.65	51.78
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.61	51.47
TraesCS7D01G004000.1	Wheat	cytosol	51.25	51.25
TraesCS7A01G003500.1	Wheat	cytosol	50.99	50.99
CDY20917	Canola	cytosol	27.54	50.98
VIT_09s0054g01480.t01	Wine grape	cytosol	28.06	50.71
EES13537	Sorghum	cytosol	50.46	50.26
VIT_09s0054g01250.t01	Wine grape	cytosol	19.63	50.17
Os08t0223900-00	Rice	cytosol	50.99	49.3
HORVU7Hr1G000400.1	Barley	cytosol, plastid	47.83	49.25
VIT_09s0054g01290.t01	Wine grape	cytosol	8.3	48.84
Zm00001d024337_P001	Maize	cytosol	46.51	48.82
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.08	48.44
VIT_09s0054g01280.t01	Wine grape	cytosol	22.13	47.32
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	10.01	46.06
VIT_09s0054g01090.t01	Wine grape	cytosol	53.75	42.99
VIT_09s0054g01170.t01	Wine grape	cytosol	2.24	37.78
CDY34478	Canola	cytosol, extracellular	18.18	37.0

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100246387	wikigene:100246387	EntrezGene:100251443	wikigene:100251443	MapMan:9.1.4.3
ProteinID:CBI30906	ProteinID:CBI30906.3	UniProt:D7TK84	EMBL:FN595992	GO:GO:0003674	GO:GO:0003824
GO:GO:0016853	GO:GO:0016866	EntrezGene:LOC100246387	wikigene:LOC100246387	EntrezGene:LOC100251443	wikigene:LOC100251443
PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0001BE34F5	ArrayExpress:VIT_10s0003g03650	EnsemblPlantsGene:VIT_10s0003g03650	EnsemblPlants:VIT_10s0003g03650.t01	RefSeq:XP_002269395	RefSeq:XP_002269395.1
RefSeq:XP_002270051	RefSeq:XP_002270051.2	:	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:D7TK84]

Coordinates

chr10:+:6143880..6149538

Molecular Weight (calculated)

87197.0 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.402

Length

759 amino acids

Sequence
(BLAST)

001: MWKLKVAEGH GPWLYSLNNF VGRQIWEFDP EAGTPEEREE VRKVQENFTT NRFRYKPNGD LLMRMQLIKE NKIDLSIPPV RLGENEEVTY EAVTTAVRKS
101: VRLNRAIQAK DGHWPAENTG PLFFTPPLIM VLYFTGTLNI ALTPEHKVEL LRYITNHQNE DGGWGFHIEG HSTMLGTTLN YISMRILGVG PDDKAVAAGR
201: KWIVDRGGAT HSPSWGKCYL SVFGLYEWSG CNPLPPEFWL FPSFLPMHPD KMWCYCRTIY MPMSYLYGTR FQAPITDLVL QLREEMHTEP YHEINWAKAR
301: LLCAKEDYYY PHSLIQDVLW GGLYHFGEPI LKHWPVSKIR ERAVKKAIDI IHWEDENSRY ITPGCVEKAF HMMAVWAENP DSNSDAFKHH LARIPDYLWM
401: AEDGMKVQSF GSQLWDTSLC IQAILESGMV EEYGTTLKKG HDYVKLSQCQ ENPSGDYRSR YRHFSKGAWT FSDRDHGWQV SDCTSEALRV LLLLSQFPKE
501: LVGEKAEPQR LFDAVNFLFS LQGKSGGVAV WEPAGAEEWL EKLNPSELFA NIVTEHEYVE CTSSTIQTLL LFKKLYPNHR RKEVDNFTEK ATRYVENVQR
601: PDGSWYGGWG VCFTYAAWFA LSGLAAVGKT YSNSKTVRKG VDFLLSKQKA NGGWGESYLS CPDMVYVHLE GDHTNLVQTA WCLMGLIEAG QVESDPTPLH
701: KAAKLLINSQ LDNGDFPQEE VTGVYMNNCM QHYASYRNIF PTWALGMYRR RVLKPLQKL

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.