Factsheet for VIT_04s0008g02980.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	30.13	69.12
KXG29303	Sorghum	cytosol	30.13	57.32
TraesCS2B01G407200.1	Wheat	cytosol	26.92	56.0
PGSC0003DMT400048787	Potato	cytosol	19.87	53.45
VIT_09s0054g01170.t01	Wine grape	cytosol	15.38	53.33
VIT_09s0054g01160.t01	Wine grape	extracellular	22.44	34.65
PGSC0003DMT400062376	Potato	extracellular, vacuole	30.77	24.87
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	39.74	23.66
VIT_09s0054g01470.t01	Wine grape	cytosol	49.36	19.54
VIT_09s0054g01340.t01	Wine grape	cytosol	48.72	18.36
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	6.41	14.93
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	48.72	14.84
VIT_09s0054g01180.t01	Wine grape	cytosol	51.28	12.44
VIT_09s0054g01220.t01	Wine grape	cytosol	56.41	11.62
VIT_09s0054g01230.t01	Wine grape	cytosol	57.05	11.57
VIT_10s0003g03530.t01	Wine grape	cytosol	53.85	11.57
VIT_09s0054g01390.t01	Wine grape	cytosol	56.41	11.47
VIT_11s0065g00640.t01	Wine grape	cytosol	54.49	11.18
VIT_09s0054g01410.t01	Wine grape	cytosol	55.13	11.18
VIT_10s0003g03650.t01	Wine grape	cytosol	53.85	11.07
VIT_09s0054g01210.t01	Wine grape	cytosol	53.21	10.96
VIT_10s0003g03660.t01	Wine grape	cytosol	55.13	10.87
VIT_09s0054g01550.t01	Wine grape	cytosol	50.0	10.29
VIT_09s0018g00630.t01	Wine grape	cytosol	50.0	10.29
VIT_09s0054g01520.t01	Wine grape	cytosol	56.41	10.13
VIT_11s0065g00030.t01	Wine grape	cytosol	48.72	10.03
Os02t0139700-01	Rice	cytosol	48.08	9.88
TraesCS6D01G098800.1	Wheat	mitochondrion	48.08	9.8
EES06259	Sorghum	cytosol	47.44	9.78
TraesCS6B01G139000.1	Wheat	golgi	47.44	9.74
Zm00001d015234_P002	Maize	cytosol	47.44	9.71
VIT_09s0054g01110.t01	Wine grape	cytosol	49.36	9.67
TraesCS6A01G110800.1	Wheat	cytosol, golgi	46.79	9.61
EES06258	Sorghum	cytosol	46.79	9.59
Zm00001d053889_P004	Maize	cytosol	46.15	9.47
TraesCS6B01G138500.1	Wheat	cytosol	43.59	9.44
TraesCS6D01G099400.2	Wheat	cytosol	47.44	9.3
TraesCS6A01G110200.1	Wheat	mitochondrion	44.23	9.15
TraesCS5A01G004900.1	Wheat	mitochondrion	44.23	9.09
TraesCS5D01G011800.1	Wheat	mitochondrion	44.23	9.09
VIT_10s0003g03520.t01	Wine grape	cytosol	43.59	9.03
VIT_09s0054g01500.t01	Wine grape	cytosol	5.77	9.0
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	43.59	8.98
HORVU6Hr1G019840.10	Barley	mitochondrion	45.51	8.98
TraesCS6D01G098600.1	Wheat	cytosol	48.72	8.95
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	6.41	8.85
TraesCS5D01G006600.1	Wheat	cytosol	42.95	8.82
TraesCS2D01G387000.1	Wheat	cytosol, plastid	43.59	8.79
VIT_09s0054g01120.t01	Wine grape	cytosol	38.46	8.43
TraesCS5D01G006700.1	Wheat	cytosol	41.03	8.42
Zm00001d008674_P001	Maize	mitochondrion	27.56	8.3
VIT_09s0054g01370.t01	Wine grape	cytosol	7.05	8.21
VIT_09s0054g01090.t01	Wine grape	cytosol	49.36	8.11
TraesCS5B01G004800.1	Wheat	cytosol	37.82	7.94
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	4.49	6.42
Zm00001d008671_P001	Maize	cytosol	19.23	5.66
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	6.41	5.65
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	15.38	5.58
EES08419	Sorghum	cytosol, mitochondrion, plastid	7.05	5.53
VIT_09s0054g01130.t01	Wine grape	cytosol	6.41	5.35
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	8.97	5.09
VIT_10s0003g03610.t01	Wine grape	cytosol	7.05	3.9
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	14.74	3.61
VIT_04s0008g03000.t01	Wine grape	cytosol	7.05	3.58
CDY29789	Canola	cytosol	1.92	3.06
VIT_10s0003g03550.t01	Wine grape	extracellular	1.92	3.0
TraesCS2B01G407300.1	Wheat	cytosol	8.33	2.95
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	1.28	2.94
VIT_09s0054g01480.t01	Wine grape	cytosol	7.69	2.86
VIT_09s0054g01280.t01	Wine grape	cytosol	6.41	2.82
VIT_09s0054g01250.t01	Wine grape	cytosol	3.85	2.02
Os02t0139500-02	Rice	cytosol	4.49	1.98
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	1.92	1.82
VIT_09s0054g01290.t01	Wine grape	cytosol	1.28	1.55
VIT_10s0003g03570.t01	Wine grape	cytosol	1.28	1.39
VIT_04s0008g02990.t01	Wine grape	cytosol	0.64	1.06
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	1.28	0.68
VIT_09s0054g01140.t01	Wine grape	extracellular	0.64	0.51
VIT_10s0003g03540.t01	Wine grape	cytosol	0.64	0.45
VIT_10s0116g01060.t01	Wine grape	cytosol	0.0	0.0
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	0.0	0.0
VIT_09s0054g01200.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_04s0008g02980	EMBL:FN595231	EnsemblPlants:VIT_04s0008g02980.t01	EnsemblPlantsGene:VIT_04s0008g02980	Gene3D:1.50.10.20	InterPro:SQ_cyclase_C
InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	PFAM:PF13243	ProteinID:CBI20812	ProteinID:CBI20812.3
SEG:seg	SUPFAM:SSF48239	UniParc:UPI0001BE1CCD	UniProt:D7SU63	MapMan:35.1	:

Description

No Description!

Coordinates

chr4:-:2484776..2492030

Molecular Weight (calculated)

17925.0 Da

IEP (calculated)

10.110

GRAVY (calculated)

-0.171

Length

156 amino acids

Sequence
(BLAST)

001: MFKCRMAHGM GAGEFALLGS KRLQFSARIK ARRWRLGESY LSCPKKEYVP LEGEQSNLVQ TAWSLMGLIP AGQAERDPPP LHRAAKLLIN SQMENGDFPQ
101: QEITGAFLRN CMLHYAAYRS VFPLWAIGEY RSRDQNFFGE TIFFLKKKTI ILFIIF

Best Arabidopsis Sequence Match ( AT1G78955.1 )
(BLAST)

001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.