Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G139000.1 | Wheat | golgi | 91.53 | 95.26 |
TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 91.53 | 95.26 |
TraesCS6D01G099400.2 | Wheat | cytosol | 91.66 | 91.08 |
EES06259 | Sorghum | cytosol | 82.68 | 86.39 |
Os02t0139700-01 | Rice | cytosol | 81.16 | 84.58 |
EES06258 | Sorghum | cytosol | 79.52 | 82.65 |
Zm00001d015234_P002 | Maize | cytosol | 79.52 | 82.55 |
Zm00001d053889_P004 | Maize | cytosol | 79.27 | 82.5 |
GSMUA_Achr7P15790_001 | Banana | cytosol | 61.31 | 79.9 |
PGSC0003DMT400073861 | Potato | mitochondrion | 45.76 | 73.43 |
KRH74134 | Soybean | endoplasmic reticulum | 69.91 | 73.05 |
VIT_11s0065g00640.t01 | Wine grape | cytosol | 69.28 | 72.11 |
AT2G07050.1 | Thale cress | cytosol | 69.03 | 71.94 |
CDY50938 | Canola | cytosol | 69.15 | 71.69 |
Bra013167.1-P | Field mustard | cytosol | 69.15 | 71.32 |
CDX93093 | Canola | cytosol | 69.15 | 71.22 |
VIT_09s0054g01250.t01 | Wine grape | cytosol | 26.68 | 71.04 |
VIT_09s0018g00630.t01 | Wine grape | cytosol | 67.51 | 70.45 |
VIT_09s0054g01550.t01 | Wine grape | cytosol | 67.38 | 70.32 |
VIT_09s0054g01180.t01 | Wine grape | cytosol | 56.76 | 69.83 |
CDX85104 | Canola | cytosol | 67.13 | 69.5 |
VIT_09s0054g01120.t01 | Wine grape | cytosol | 62.45 | 69.38 |
CDX77512 | Canola | cytosol | 68.02 | 69.24 |
Solyc04g070980.2.1 | Tomato | plastid | 66.37 | 69.08 |
VIT_09s0054g01110.t01 | Wine grape | cytosol | 68.02 | 67.59 |
Solyc04g050670.1.1 | Tomato | cytosol | 13.65 | 66.67 |
HORVU5Hr1G122220.1 | Barley | mitochondrion | 63.34 | 66.01 |
Bra014952.1-P | Field mustard | cytosol | 65.61 | 61.49 |
VIT_09s0054g01330.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 5.06 | 58.82 |
HORVU7Hr1G047790.3 | Barley | cytosol, extracellular | 5.69 | 57.69 |
VIT_09s0054g01090.t01 | Wine grape | cytosol | 68.02 | 56.69 |
HORVU7Hr1G047800.10 | Barley | mitochondrion | 47.41 | 53.96 |
HORVU0Hr1G022610.20 | Barley | cytosol | 30.72 | 53.29 |
HORVU6Hr1G020020.1 | Barley | mitochondrion | 34.01 | 53.06 |
HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 48.67 | 52.24 |
PGSC0003DMT400048787 | Potato | cytosol | 3.79 | 51.72 |
VIT_04s0008g03000.t01 | Wine grape | cytosol | 19.72 | 50.81 |
HORVU0Hr1G025390.3 | Barley | endoplasmic reticulum | 48.67 | 49.61 |
HORVU0Hr1G022520.1 | Barley | mitochondrion | 20.73 | 49.1 |
VIT_04s0008g02990.t01 | Wine grape | cytosol | 5.82 | 48.94 |
HORVU6Hr1G019940.2 | Barley | nucleus | 22.88 | 46.17 |
VIT_04s0008g02980.t01 | Wine grape | mitochondrion | 8.98 | 45.51 |
HORVU6Hr1G019760.1 | Barley | mitochondrion | 4.05 | 43.24 |
PGSC0003DMT400062376 | Potato | extracellular, vacuole | 10.49 | 43.01 |
PGSC0003DMT400077891 | Potato | extracellular, golgi, mitochondrion, plastid | 20.23 | 37.21 |
CDY29789 | Canola | cytosol | 4.05 | 32.65 |
Protein Annotations
Gene3D:1.50.10.20 | MapMan:9.1.4.3 | MapMan:9.1.5.3 | UniProt:A0A287TI84 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0016853 | GO:GO:0016866 | EnsemblPlantsGene:HORVU6Hr1G019840 | EnsemblPlants:HORVU6Hr1G019840.10 | PFAM:PF13243 | PFAM:PF13249 |
ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF27 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 |
InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000B47536F | SEG:seg |
Description
Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A287TI84]
Coordinates
chrchr6H:+:54574753..54585820
Molecular Weight (calculated)
89473.8 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.340
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: RGGRRRRAKK ATPRHATSPH RALAPVQLQT PLPPRPARSE APLTNSSPDR GGRSRQVWEF DAAADDPDAL AAVDAARREF AARRHRLKHS ADLPMRIQLA
101: KENPLKLDLP AIKLGENEDV TEEAVSTSLR RAISSFSTLQ AHDGHWPGDY GGPMFLMPGL LIMLHVTGAL NTVLSSEHQK EIRRYLYNHQ NEDGGWGLHI
201: EGPSTMFGSA LTYVSLRLLG EGPDSGDGAM EKGRNWILDH GGATYITSWG KFWLAVLGVF DWSGNNPLPP ELWMLPYCLP VHPGRMWCHC RMVYLPMCYV
301: YGKRFVGRIT PIILELRNEL FKVPYSEVDW NSARNLCAKE DLYYPHPLIQ DILWATLHKF VEPVMMHWPG NKLREKSLNH VMQHVHYEDE NTRYICIGPV
401: NKVLNMLACW IEDPNSEAFK LHIPRIYDYL WFAEDGMKMQ GYNGSQLWDT AFAVQAIAAT DLIEEFAPTL KLAHDYIKNS QVVDDCPGDL SYWYRHISKG
501: AWPFSTTDHG WPISDCTAEG LKASLLLSKI SPEIVGEPVE VNRLYDAVNC LMSWMNENGG FATYELQRSY AWLELVNPAE TFGDIVIDYP YVECTSAAIQ
601: ALTSFKKLYP GHRRKDVDNC INKAANYIES IQRSDGSWYG SWAVCFTYGT WFGVKGLVAA GRTFKNSPAI RKACDFLMSK ELPFGGWGES YLSSQDQVYT
701: NLEGKHTHAV NTGWAMLTLI DAGQAERDPT PLHRAAKVLI NLQSEDGEFP QQEIMGVFNK NCMISYSQYR NIFPIWALGE YRCRVLGVGK K
101: KENPLKLDLP AIKLGENEDV TEEAVSTSLR RAISSFSTLQ AHDGHWPGDY GGPMFLMPGL LIMLHVTGAL NTVLSSEHQK EIRRYLYNHQ NEDGGWGLHI
201: EGPSTMFGSA LTYVSLRLLG EGPDSGDGAM EKGRNWILDH GGATYITSWG KFWLAVLGVF DWSGNNPLPP ELWMLPYCLP VHPGRMWCHC RMVYLPMCYV
301: YGKRFVGRIT PIILELRNEL FKVPYSEVDW NSARNLCAKE DLYYPHPLIQ DILWATLHKF VEPVMMHWPG NKLREKSLNH VMQHVHYEDE NTRYICIGPV
401: NKVLNMLACW IEDPNSEAFK LHIPRIYDYL WFAEDGMKMQ GYNGSQLWDT AFAVQAIAAT DLIEEFAPTL KLAHDYIKNS QVVDDCPGDL SYWYRHISKG
501: AWPFSTTDHG WPISDCTAEG LKASLLLSKI SPEIVGEPVE VNRLYDAVNC LMSWMNENGG FATYELQRSY AWLELVNPAE TFGDIVIDYP YVECTSAAIQ
601: ALTSFKKLYP GHRRKDVDNC INKAANYIES IQRSDGSWYG SWAVCFTYGT WFGVKGLVAA GRTFKNSPAI RKACDFLMSK ELPFGGWGES YLSSQDQVYT
701: NLEGKHTHAV NTGWAMLTLI DAGQAERDPT PLHRAAKVLI NLQSEDGEFP QQEIMGVFNK NCMISYSQYR NIFPIWALGE YRCRVLGVGK K
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.