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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G139000.1 Wheat golgi 91.53 95.26
TraesCS6A01G110800.1 Wheat cytosol, golgi 91.53 95.26
TraesCS6D01G099400.2 Wheat cytosol 91.66 91.08
EES06259 Sorghum cytosol 82.68 86.39
Os02t0139700-01 Rice cytosol 81.16 84.58
EES06258 Sorghum cytosol 79.52 82.65
Zm00001d015234_P002 Maize cytosol 79.52 82.55
Zm00001d053889_P004 Maize cytosol 79.27 82.5
GSMUA_Achr7P15790_001 Banana cytosol 61.31 79.9
PGSC0003DMT400073861 Potato mitochondrion 45.76 73.43
KRH74134 Soybean endoplasmic reticulum 69.91 73.05
VIT_11s0065g00640.t01 Wine grape cytosol 69.28 72.11
AT2G07050.1 Thale cress cytosol 69.03 71.94
CDY50938 Canola cytosol 69.15 71.69
Bra013167.1-P Field mustard cytosol 69.15 71.32
CDX93093 Canola cytosol 69.15 71.22
VIT_09s0054g01250.t01 Wine grape cytosol 26.68 71.04
VIT_09s0018g00630.t01 Wine grape cytosol 67.51 70.45
VIT_09s0054g01550.t01 Wine grape cytosol 67.38 70.32
VIT_09s0054g01180.t01 Wine grape cytosol 56.76 69.83
CDX85104 Canola cytosol 67.13 69.5
VIT_09s0054g01120.t01 Wine grape cytosol 62.45 69.38
CDX77512 Canola cytosol 68.02 69.24
Solyc04g070980.2.1 Tomato plastid 66.37 69.08
VIT_09s0054g01110.t01 Wine grape cytosol 68.02 67.59
Solyc04g050670.1.1 Tomato cytosol 13.65 66.67
HORVU5Hr1G122220.1 Barley mitochondrion 63.34 66.01
Bra014952.1-P Field mustard cytosol 65.61 61.49
VIT_09s0054g01330.t01 Wine grape cytosol, mitochondrion, peroxisome 5.06 58.82
HORVU7Hr1G047790.3 Barley cytosol, extracellular 5.69 57.69
VIT_09s0054g01090.t01 Wine grape cytosol 68.02 56.69
HORVU7Hr1G047800.10 Barley mitochondrion 47.41 53.96
HORVU0Hr1G022610.20 Barley cytosol 30.72 53.29
HORVU6Hr1G020020.1 Barley mitochondrion 34.01 53.06
HORVU7Hr1G000400.1 Barley cytosol, plastid 48.67 52.24
PGSC0003DMT400048787 Potato cytosol 3.79 51.72
VIT_04s0008g03000.t01 Wine grape cytosol 19.72 50.81
HORVU0Hr1G025390.3 Barley endoplasmic reticulum 48.67 49.61
HORVU0Hr1G022520.1 Barley mitochondrion 20.73 49.1
VIT_04s0008g02990.t01 Wine grape cytosol 5.82 48.94
HORVU6Hr1G019940.2 Barley nucleus 22.88 46.17
VIT_04s0008g02980.t01 Wine grape mitochondrion 8.98 45.51
HORVU6Hr1G019760.1 Barley mitochondrion 4.05 43.24
PGSC0003DMT400062376 Potato extracellular, vacuole 10.49 43.01
PGSC0003DMT400077891 Potato extracellular, golgi, mitochondrion, plastid 20.23 37.21
CDY29789 Canola cytosol 4.05 32.65
Protein Annotations
Gene3D:1.50.10.20MapMan:9.1.4.3MapMan:9.1.5.3UniProt:A0A287TI84GO:GO:0003674GO:GO:0003824
GO:GO:0016853GO:GO:0016866EnsemblPlantsGene:HORVU6Hr1G019840EnsemblPlants:HORVU6Hr1G019840.10PFAM:PF13243PFAM:PF13249
ScanProsite:PS01074PANTHER:PTHR11764PANTHER:PTHR11764:SF27InterPro:SQ_cyclase_CInterPro:SQ_cyclase_NSUPFAM:SSF48239
InterPro:Squalene_cyclaseTIGRFAMs:TIGR01787InterPro:Terpene_synthase_CSInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI000B47536FSEG:seg
Description
Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A287TI84]
Coordinates
chrchr6H:+:54574753..54585820
Molecular Weight (calculated)
89473.8 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.340
Length
791 amino acids
Sequence
(BLAST)
001: RGGRRRRAKK ATPRHATSPH RALAPVQLQT PLPPRPARSE APLTNSSPDR GGRSRQVWEF DAAADDPDAL AAVDAARREF AARRHRLKHS ADLPMRIQLA
101: KENPLKLDLP AIKLGENEDV TEEAVSTSLR RAISSFSTLQ AHDGHWPGDY GGPMFLMPGL LIMLHVTGAL NTVLSSEHQK EIRRYLYNHQ NEDGGWGLHI
201: EGPSTMFGSA LTYVSLRLLG EGPDSGDGAM EKGRNWILDH GGATYITSWG KFWLAVLGVF DWSGNNPLPP ELWMLPYCLP VHPGRMWCHC RMVYLPMCYV
301: YGKRFVGRIT PIILELRNEL FKVPYSEVDW NSARNLCAKE DLYYPHPLIQ DILWATLHKF VEPVMMHWPG NKLREKSLNH VMQHVHYEDE NTRYICIGPV
401: NKVLNMLACW IEDPNSEAFK LHIPRIYDYL WFAEDGMKMQ GYNGSQLWDT AFAVQAIAAT DLIEEFAPTL KLAHDYIKNS QVVDDCPGDL SYWYRHISKG
501: AWPFSTTDHG WPISDCTAEG LKASLLLSKI SPEIVGEPVE VNRLYDAVNC LMSWMNENGG FATYELQRSY AWLELVNPAE TFGDIVIDYP YVECTSAAIQ
601: ALTSFKKLYP GHRRKDVDNC INKAANYIES IQRSDGSWYG SWAVCFTYGT WFGVKGLVAA GRTFKNSPAI RKACDFLMSK ELPFGGWGES YLSSQDQVYT
701: NLEGKHTHAV NTGWAMLTLI DAGQAERDPT PLHRAAKVLI NLQSEDGEFP QQEIMGVFNK NCMISYSQYR NIFPIWALGE YRCRVLGVGK K
Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.