Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G099900.1 | Wheat | cytosol | 47.96 | 91.26 |
| HORVU7Hr1G047790.3 | Barley | cytosol, extracellular | 14.29 | 71.79 |
| Os02t0140400-01 | Rice | cytosol | 59.44 | 54.31 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 57.4 | 45.45 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 45.15 | 38.82 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 61.99 | 37.79 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 70.66 | 36.07 |
| TraesCS6A01G111400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 70.66 | 35.83 |
| Os11t0562100-01 | Rice | plasma membrane | 61.48 | 31.63 |
| Zm00001d050625_P001 | Maize | mitochondrion | 47.45 | 28.01 |
| HORVU0Hr1G025390.3 | Barley | endoplasmic reticulum | 52.55 | 26.55 |
| EES04501 | Sorghum | cytosol | 43.62 | 23.14 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 5.87 | 23.0 |
| HORVU6Hr1G019840.10 | Barley | mitochondrion | 46.17 | 22.88 |
| HORVU5Hr1G122220.1 | Barley | mitochondrion | 44.13 | 22.79 |
| HORVU7Hr1G047800.10 | Barley | mitochondrion | 40.31 | 22.73 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 42.6 | 22.66 |
| Os02t0140500-00 | Rice | mitochondrion | 1.53 | 6.74 |
| HORVU6Hr1G020020.1 | Barley | mitochondrion | 8.67 | 6.71 |
| HORVU0Hr1G022520.1 | Barley | mitochondrion | 5.61 | 6.59 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 0.77 | 4.05 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G019940.2 | EnsemblPlantsGene:HORVU6Hr1G019940 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | PFAM:PF13243 |
| ScanProsite:PS01074 | SUPFAM:SSF48239 | UniParc:UPI000B466448 | UniProt:A0A287TI92 | MapMan:9.1.4.3 | : |
Description
No Description!
Coordinates
chrchr6H:+:55219742..55242380
Molecular Weight (calculated)
45043.9 Da
IEP (calculated)
8.956
GRAVY (calculated)
-0.474
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYQQRCEHG LHACTSRAPS KTKVKEGRSR KDQTVWMSHG QLKIRIYKQK RQNRDIIWIL GCNSNRRCWA SKRRDCAECD ANYCQECDLL NQNQGKLHDI
101: QTRSKVRLGS RVFTQHRSNS RKAALTAVLL LSKTSRNIVG DPIERERVHD AVDCLLSFVN KDGTFSTYEC KRTSAWIEIL NPCESFPNMI VDHPYPECTS
201: SVLQALILFK EIHYVYRTKE IEKCIRDAAA FIESRQGEDG SWLGTWGVCF TYGAFFSVKA LVAAGRTYEN SSFIRKGCHF ILSKQLITGG WGESNVSNET
301: KVYVNIEGDR AHAVNTAWGM LTLIYAGQMQ RDPAPLHRAA KELINMQMDT GEFPQQEHVG CFNCSLFFNY PNYRNLFPIW ALGEYRRCLC AK
101: QTRSKVRLGS RVFTQHRSNS RKAALTAVLL LSKTSRNIVG DPIERERVHD AVDCLLSFVN KDGTFSTYEC KRTSAWIEIL NPCESFPNMI VDHPYPECTS
201: SVLQALILFK EIHYVYRTKE IEKCIRDAAA FIESRQGEDG SWLGTWGVCF TYGAFFSVKA LVAAGRTYEN SSFIRKGCHF ILSKQLITGG WGESNVSNET
301: KVYVNIEGDR AHAVNTAWGM LTLIYAGQMQ RDPAPLHRAA KELINMQMDT GEFPQQEHVG CFNCSLFFNY PNYRNLFPIW ALGEYRRCLC AK
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.