CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0140400-01	Rice	cytosol	56.77	85.08
TraesCS6D01G099900.1	Wheat	cytosol	27.06	84.47
Os02t0140200-01	Rice	mitochondrion, plasma membrane, vacuole	60.81	78.99
Zm00001d015239_P007	Maize	mitochondrion	90.98	76.77
TraesCS4A01G498900.1	Wheat	cytosol	10.42	72.83
TraesCS6B01G139500.1	Wheat	mitochondrion	83.51	69.92
TraesCS6D01G100000.1	Wheat	mitochondrion	82.89	69.4
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	83.05	69.08
Os11t0562100-01	Rice	plasma membrane	81.18	68.5
EES04501	Sorghum	cytosol	78.23	68.06
KXG35171	Sorghum	extracellular	62.52	63.71
HORVU6Hr1G020020.1	Barley	mitochondrion	49.3	62.52
HORVU6Hr1G019940.2	Barley	nucleus	37.79	61.99
KXG29303	Sorghum	cytosol	7.78	60.98
EER90340	Sorghum	cytosol	68.43	59.95
OQU77014	Sorghum	cytosol	60.65	58.82
OQU80191	Sorghum	cytosol, mitochondrion	65.47	55.91
OQU80182	Sorghum	mitochondrion	63.14	55.77
EES14558	Sorghum	cytosol	63.45	53.83
KXG24790	Sorghum	cytosol, mitochondrion	66.1	53.59
EES17376	Sorghum	mitochondrion	62.83	53.3
KXG28793	Sorghum	mitochondrion	62.99	52.87
KXG23805	Sorghum	cytosol	62.21	52.84
OQU91432	Sorghum	cytosol	63.76	51.64
KXG28324	Sorghum	cytosol	21.77	50.91
EES06259	Sorghum	cytosol	59.1	50.2
EES06258	Sorghum	cytosol	59.25	50.07
OQU83221	Sorghum	cytosol	55.99	47.0
EES13537	Sorghum	cytosol	51.17	43.18
HORVU0Hr1G022520.1	Barley	mitochondrion	19.75	38.02
VIT_10s0003g03550.t01	Wine grape	extracellular	4.67	30.0
EES08419	Sorghum	cytosol, mitochondrion, plastid	7.15	23.12
Os02t0140500-00	Rice	mitochondrion	1.24	8.99
HORVU6Hr1G019760.1	Barley	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	UniProt:A0A194YMN3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	EnsemblPlants:KXG29446	ProteinID:KXG29446	ProteinID:KXG29446.1	PFAM:PF13243	PFAM:PF13249
ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	EnsemblPlantsGene:SORBI_3004G037300	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	SignalP:SignalP-noTM	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0007F28FF4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:3025572..3033599

Molecular Weight (calculated)

73149.4 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.194

Length

643 amino acids

Sequence
(BLAST)

001: MFIMPGLIFA LYVTGSMNVV ISPEHRREIC RYIYNHQNKD GGWSTLILGS STMFGTCSNY ITLRLLGEEP YGNNGALAKG RAWILSHGGA TLIPQWGKIW
101: LSVLGVFDWS GNNPIFPELW LAPQFLPFHP GKFWCLTRMV YLPMAYLYGK KFVGPITPTI LALREEIYDT PYGEIGWSDA ANKCAKEDLV CPRTLLQNVF
201: WTSLYRCVEP VLSSCPVNKL RERALGNLMD HIHYEDENTQ YLCICSVNKA LNMVCCWVED PNSDAFKRHL ARIPDFLWLS EDGMKAQIYD GCQSWETSFI
301: IQAFCATDLV NEYAPTLQRA YEFMKNSQVL RNHPGDQSYW HRHRSKGSWT LSSADNGWAV SDTTGEALKA VLLLSKISNK NNLIGDPIER ERLHDAIDCL
401: LSFVNKDGTF STYECKRTSS WIEILNPCES FPNMVVDYPY PECTSSVLQA LILFKELYPG YRTEEIETLV RNAATFIENR QQEDGSWLGT WGVCFTYGAF
501: FSIKGLVASG RTYKNSLSIR KACHFILSKQ LSTGGWGESH VSNETQVYVN IKGDCAHAVN TAWAMLALIY AGQFERDPTP LHRAAKELIN MQLETGEFPQ
601: QEHVGCFNCS LFFNYPNYRN LFPIWALGEY HRGLSAKKRN ESI

Best Arabidopsis Sequence Match ( AT1G78955.1 )
(BLAST)

001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.