Factsheet for TraesCS4A01G498900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G499100.1	Wheat	cytosol	79.35	18.3
Os02t0140400-01	Rice	cytosol	71.74	15.38
Os02t0140200-01	Rice	mitochondrion, plasma membrane, vacuole	68.48	12.73
TraesCS7A01G001700.1	Wheat	mitochondrion	91.3	12.17
TraesCS4A01G498200.2	Wheat	cytosol	94.57	11.58
KXG29446	Sorghum	endoplasmic reticulum, extracellular	72.83	10.42
TraesCS7A01G232900.1	Wheat	mitochondrion	84.78	10.39
TraesCS4A01G496400.1	Wheat	mitochondrion	83.7	10.19
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	71.74	8.54
Os11t0562100-01	Rice	plasma membrane	66.3	8.01
TraesCS4A01G000600.1	Wheat	mitochondrion	63.04	7.67
Zm00001d050625_P001	Maize	mitochondrion	52.17	7.23
TraesCS6A01G110800.1	Wheat	cytosol, golgi	58.7	7.11
TraesCS4A01G495100.1	Wheat	cytosol	51.09	6.21
TraesCS7A01G003500.1	Wheat	cytosol	51.09	6.19
TraesCS5A01G004900.1	Wheat	mitochondrion	50.0	6.06
TraesCS6A01G110200.1	Wheat	mitochondrion	48.91	5.97
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	48.91	5.94
Os02t0140500-00	Rice	mitochondrion	5.43	5.62
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	16.3	2.35
EES04501	Sorghum	cytosol	11.96	1.49
HORVU6Hr1G020020.1	Barley	mitochondrion	2.17	0.39
VIT_10s0003g03550.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G498900.1	EnsemblPlantsGene:TraesCS4A01G498900	Gene3D:1.50.10.20	InterPro:SQ_cyclase_C	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF23	PFAM:PF13243	SUPFAM:SSF48239	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:743986439..743987373

Molecular Weight (calculated)

10564.4 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.430

Length

92 amino acids

Sequence
(BLAST)

1: MESYVDAGSP HAVNTAWAML ALIYAGQVER DPTPLYHAAK ELVNMQLDTG EFPQQEHVGC FNCSFYYNHG NYSNLFPIWA LGELRRRLRE KN

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.