Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G498900.1 | Wheat | cytosol | 12.17 | 91.3 |
| TraesCS4A01G498200.2 | Wheat | cytosol | 92.46 | 84.95 |
| TraesCS4A01G499100.1 | Wheat | cytosol | 46.96 | 81.2 |
| TraesCS7A01G232900.1 | Wheat | mitochondrion | 87.39 | 80.29 |
| TraesCS4A01G496400.1 | Wheat | mitochondrion | 85.22 | 77.78 |
| Os06t0483200-02 | Rice | cytosol, mitochondrion, peroxisome, plastid | 21.01 | 75.13 |
| HORVU7Hr1G047800.10 | Barley | mitochondrion | 74.78 | 74.24 |
| TraesCS7D01G001800.3 | Wheat | mitochondrion | 45.36 | 72.29 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 75.65 | 69.32 |
| Zm00001d052971_P005 | Maize | mitochondrion | 74.93 | 68.39 |
| OQU80182 | Sorghum | mitochondrion | 72.03 | 68.27 |
| EES14558 | Sorghum | cytosol | 74.35 | 67.68 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 76.96 | 66.96 |
| KXG28793 | Sorghum | mitochondrion | 74.06 | 66.71 |
| TraesCS4A01G000600.1 | Wheat | mitochondrion | 66.96 | 61.11 |
| TraesCS6A01G111400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 68.12 | 60.8 |
| TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 59.28 | 53.82 |
| TraesCS6A01G110200.1 | Wheat | mitochondrion | 57.68 | 52.79 |
| TraesCS5A01G004900.1 | Wheat | mitochondrion | 57.39 | 52.17 |
| TraesCS5A01G005900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 46.09 | 49.92 |
| TraesCS6A01G110300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 54.35 | 49.54 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 52.9 | 48.22 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 52.17 | 47.43 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.93 | 34.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G001700.1 | EnsemblPlantsGene:TraesCS7A01G001700 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg | SUPFAM:SSF48239 |
| TIGR:cd02892 | TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:1280622..1295251
Molecular Weight (calculated)
79186.7 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.248
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVSEGG GPWLRSVNNF LGRAVWEFDP DHGTPEERAE VDRVRREFTQ RRFQKRESHD LLMRMQYAKE KHLQVQVDHP AIKLVDIAQV TQETILTSLR
101: RALSQHSALQ AHDGHWPGDY SGIMFIMPIL IFALHVTRTL NTVLSREHRR EICRYIYNHQ NKDGGWGTQV LGPSTMFGSC LNYVTLRLLD EVDNEALIKG
201: RAWILLHGSA AAIPQWGKIW LSVVGLYEWS GNNLIIPELW LVPHFLPIHP GRFWCFCRLI YMPMSYLYGK KFVGPITPTI LAIREELYSI PYREVDWNKA
301: RDTCAKALNM ICCWIDDPKS DALKFHIPRI YDYLWLAEDG MKAQVYDGCQ SWETAFIIQA YCSTDLINEF GPILRKAHEF IKNSQVLENH PDSKTYYRHR
401: SKGSWTLSTA DNGWSVSDCT AEALKALVLL SKISPNLVGE PIKGEGLYDA VDCLLSFMNK DGTFSTYECK RTTSLIEVLN PSETFLNIMV DYPSVECTSS
501: MLQALIMFRE IYPGYRKEEI GQCIKNASVF IENSQRKDGS WYGTWGICFT YGTLFAVQGL IASGRTYENS SFIRNACNFL LSKQLNTGGW GETYLSSETE
601: SYVDAASPHA VNTAWAMLAL IYAGQVERDP APLYHAAKEL INMQLDTGEF PQQEHIGCFN CSFYYNYGNY SNLFPIWALG EFRRRLHEKN
101: RALSQHSALQ AHDGHWPGDY SGIMFIMPIL IFALHVTRTL NTVLSREHRR EICRYIYNHQ NKDGGWGTQV LGPSTMFGSC LNYVTLRLLD EVDNEALIKG
201: RAWILLHGSA AAIPQWGKIW LSVVGLYEWS GNNLIIPELW LVPHFLPIHP GRFWCFCRLI YMPMSYLYGK KFVGPITPTI LAIREELYSI PYREVDWNKA
301: RDTCAKALNM ICCWIDDPKS DALKFHIPRI YDYLWLAEDG MKAQVYDGCQ SWETAFIIQA YCSTDLINEF GPILRKAHEF IKNSQVLENH PDSKTYYRHR
401: SKGSWTLSTA DNGWSVSDCT AEALKALVLL SKISPNLVGE PIKGEGLYDA VDCLLSFMNK DGTFSTYECK RTTSLIEVLN PSETFLNIMV DYPSVECTSS
501: MLQALIMFRE IYPGYRKEEI GQCIKNASVF IENSQRKDGS WYGTWGICFT YGTLFAVQGL IASGRTYENS SFIRNACNFL LSKQLNTGGW GETYLSSETE
601: SYVDAASPHA VNTAWAMLAL IYAGQVERDP APLYHAAKEL INMQLDTGEF PQQEHIGCFN CSFYYNYGNY SNLFPIWALG EFRRRLHEKN
001: MWRLKIGAKG GDETHLFTTN NYTGRQTWEF DADACSPEEL AEVDEARQNF SINRSRFKIS ADLLWRMQFL REKKFEQKIP RVEIGDAENI TYKDAKTALR
101: RGILYFKALQ AEDGHWPAEN SGCLFFEAPF VICLYITGHL EKILTLEHRK ELLRYMYNHQ NEDGGWGIHV EGQSAMFCTV INYICLRILG VEADLDDIKG
201: SGCARARKWI LDHGGATYTP LIGKAWLSIL GVYDWSGCKP IPPEVWMLPT FSPFNGGTLW IYFRDIFMGV SYLYGKKFVA TPTPLILQLR EELYPQPYDK
301: ILWSQARNQC AKEDLYYPQS FLQEMFWKCV HILSENILNR WPCNKLIRQK ALRTTMELLH YQDEASRYFT GGCVPKPFHM LACWVEDPDG DYFKKHLARV
401: PDYIWIGEDG LKIQSFGSQL WDTAFSLQVM LAYQDVDDDD DEIRSTLIKG YSFLNKSQLT QNPPGDHRKM LKDIAKGGWT FSDQDQGWPV SDCTAESLEC
501: CLVFGSMPSE LIGEKMDVER LYDAVNLLLY FQSKNGGITV WEAARGRTWL EWLSPVEFME DTIVEHEYVE CTGSAIVALA RFLKEFPEHR REEVEKFIKN
601: AVKYIESFQM PDGSWYGNWG VCFMYGTFFA VRGLVAAGKT YQNCEPIRKA VQFILETQNV EGGWGESYLS CPNKKYTLLE GNRTNVVNTG QALMVLIMGG
701: QMERDPLPVH RAAKVLINSQ LDNGDFPQEE IMGVFKMNVM VHYATYRNIF TLWALTYYTK ALRVPLC
101: RGILYFKALQ AEDGHWPAEN SGCLFFEAPF VICLYITGHL EKILTLEHRK ELLRYMYNHQ NEDGGWGIHV EGQSAMFCTV INYICLRILG VEADLDDIKG
201: SGCARARKWI LDHGGATYTP LIGKAWLSIL GVYDWSGCKP IPPEVWMLPT FSPFNGGTLW IYFRDIFMGV SYLYGKKFVA TPTPLILQLR EELYPQPYDK
301: ILWSQARNQC AKEDLYYPQS FLQEMFWKCV HILSENILNR WPCNKLIRQK ALRTTMELLH YQDEASRYFT GGCVPKPFHM LACWVEDPDG DYFKKHLARV
401: PDYIWIGEDG LKIQSFGSQL WDTAFSLQVM LAYQDVDDDD DEIRSTLIKG YSFLNKSQLT QNPPGDHRKM LKDIAKGGWT FSDQDQGWPV SDCTAESLEC
501: CLVFGSMPSE LIGEKMDVER LYDAVNLLLY FQSKNGGITV WEAARGRTWL EWLSPVEFME DTIVEHEYVE CTGSAIVALA RFLKEFPEHR REEVEKFIKN
601: AVKYIESFQM PDGSWYGNWG VCFMYGTFFA VRGLVAAGKT YQNCEPIRKA VQFILETQNV EGGWGESYLS CPNKKYTLLE GNRTNVVNTG QALMVLIMGG
701: QMERDPLPVH RAAKVLINSQ LDNGDFPQEE IMGVFKMNVM VHYATYRNIF TLWALTYYTK ALRVPLC
Arabidopsis Description
PEN6Seco-amyrin synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9SYN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.