Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G099900.1 | Wheat | cytosol | 26.26 | 98.54 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 95.86 | 96.48 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 69.08 | 83.05 |
| Os02t0140400-01 | Rice | cytosol | 46.05 | 82.98 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 50.97 | 79.6 |
| Zm00001d050625_P001 | Maize | mitochondrion | 67.4 | 78.46 |
| Os11t0562100-01 | Rice | plasma membrane | 76.84 | 77.95 |
| EES04501 | Sorghum | cytosol | 69.6 | 72.8 |
| TraesCS4A01G498900.1 | Wheat | cytosol | 8.54 | 71.74 |
| HORVU6Hr1G019940.2 | Barley | nucleus | 35.83 | 70.66 |
| TraesCS7A01G232900.1 | Wheat | mitochondrion | 68.05 | 70.04 |
| TraesCS7A01G001700.1 | Wheat | mitochondrion | 60.8 | 68.12 |
| TraesCS4A01G498200.2 | Wheat | cytosol | 66.11 | 68.04 |
| TraesCS4A01G499100.1 | Wheat | cytosol | 34.93 | 67.67 |
| Os02t0140500-00 | Rice | mitochondrion | 7.76 | 67.42 |
| TraesCS4A01G496400.1 | Wheat | mitochondrion | 65.2 | 66.67 |
| TraesCS4A01G000600.1 | Wheat | mitochondrion | 60.8 | 62.17 |
| TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 55.37 | 56.32 |
| TraesCS5A01G004900.1 | Wheat | mitochondrion | 55.11 | 56.13 |
| TraesCS6A01G110200.1 | Wheat | mitochondrion | 53.95 | 55.3 |
| TraesCS5A01G005900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 45.28 | 54.95 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 50.97 | 52.05 |
| TraesCS6A01G110300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 50.84 | 51.92 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 50.06 | 50.99 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 4.27 | 44.59 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.79 | 37.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G111400.1 | EnsemblPlantsGene:TraesCS6A01G111400 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg | SUPFAM:SSF48239 |
| TIGR:cd02892 | TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:80697536..80706838
Molecular Weight (calculated)
87959.6 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.338
Length
773 amino acids
Sequence
(BLAST)
(BLAST)
001: MWMLKVGEGG GPWLRSTNGF LGRAVWEFDA SAGTPEERAE VERVRQEFTD GRFRRRESAD LLMRLQCSKE NKHQGRDRRL PPMEKLEEKD EVTEDTVLVS
101: LRRALDQFSS LQSDDGCWPG DFSGIMFVMP GLIFALYVTR SLNTVVTAEH RREICRYIYN HQNEDGGWGS LILGSSSMFG TCSNYITLRL LGEELDGNTA
201: LAKGRGWISS HGSATLVPQW GKIWLSILGM YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGRKFVGPI TPTILAIREE IYDVPYDQID
301: WGMSRNACAK EDLVCPRTTL QNAVWTSLYK CVEPVLSSWP INKLRDRAQK NLMEHIHYED DNTQYLCICS VNKALNMVCC WAEDPNSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TGLVSEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWTVSDTTAE ALKAVLLLSK
501: ISRNIVGDPI ERERVHDAVD CLLSFVNKDG TFSTYECKRT STWIEILNPC ESFPNMIVDH PYPECTSSVL QALMLFKELH YGYRTKEIEK CIRDAATFIE
601: SRQGEDGSWL GTWGVCFTYG AFFSVKALVA AGRTYESSSS IRKGCHFILS KQLSTGGWGE SHVSNETKVY VNIEGDRAHA VNTAWAMLTL IYAGQMERDP
701: APLHRAAKEL INMQMDTGEF PQQEHVGCFN CSLFFNYPNY RNLFPIWALG EYRRRLCSKS TGRRAPSSCG TRV
101: LRRALDQFSS LQSDDGCWPG DFSGIMFVMP GLIFALYVTR SLNTVVTAEH RREICRYIYN HQNEDGGWGS LILGSSSMFG TCSNYITLRL LGEELDGNTA
201: LAKGRGWISS HGSATLVPQW GKIWLSILGM YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGRKFVGPI TPTILAIREE IYDVPYDQID
301: WGMSRNACAK EDLVCPRTTL QNAVWTSLYK CVEPVLSSWP INKLRDRAQK NLMEHIHYED DNTQYLCICS VNKALNMVCC WAEDPNSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TGLVSEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWTVSDTTAE ALKAVLLLSK
501: ISRNIVGDPI ERERVHDAVD CLLSFVNKDG TFSTYECKRT STWIEILNPC ESFPNMIVDH PYPECTSSVL QALMLFKELH YGYRTKEIEK CIRDAATFIE
601: SRQGEDGSWL GTWGVCFTYG AFFSVKALVA AGRTYESSSS IRKGCHFILS KQLSTGGWGE SHVSNETKVY VNIEGDRAHA VNTAWAMLTL IYAGQMERDP
701: APLHRAAKEL INMQMDTGEF PQQEHVGCFN CSLFFNYPNY RNLFPIWALG EYRRRLCSKS TGRRAPSSCG TRV
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.