Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G099900.1 | Wheat | cytosol | 26.17 | 97.57 |
| TraesCS6A01G111400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 96.48 | 95.86 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 69.92 | 83.51 |
| Os02t0140400-01 | Rice | cytosol | 45.96 | 82.28 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 51.3 | 79.6 |
| Zm00001d050625_P001 | Maize | mitochondrion | 68.49 | 79.22 |
| Os11t0562100-01 | Rice | plasma membrane | 76.82 | 77.43 |
| EES04501 | Sorghum | cytosol | 70.7 | 73.48 |
| HORVU6Hr1G019940.2 | Barley | nucleus | 36.07 | 70.66 |
| TraesCS7B01G131400.1 | Wheat | mitochondrion | 68.75 | 70.31 |
| Os02t0140500-00 | Rice | mitochondrion | 7.68 | 66.29 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 64.32 | 65.43 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 6.25 | 64.0 |
| TraesCS4B01G390800.1 | Wheat | mitochondrion | 61.98 | 63.21 |
| TraesCS4B01G390900.1 | Wheat | extracellular, plasma membrane | 52.47 | 61.81 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 32.81 | 57.14 |
| TraesCS6B01G139000.1 | Wheat | golgi | 56.12 | 56.71 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 51.56 | 55.0 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 50.91 | 52.62 |
| TraesCS5B01G545900.1 | Wheat | cytosol | 50.0 | 52.53 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 4.3 | 44.59 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.82 | 37.0 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G139500.1 | EnsemblPlantsGene:TraesCS6B01G139500 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SUPFAM:SSF48239 | TIGR:cd02892 |
| TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:136521610..136530965
Molecular Weight (calculated)
87308.1 Da
IEP (calculated)
7.111
GRAVY (calculated)
-0.316
Length
768 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVGEGG GPWLRSTNGF LGRAVWEFDA GAGTPEERAE VERMRQGFTD GRFRRRESAD LLMRLQYSKE NKHQGRDRRL PPMEKLEEKD EVTEDIVLVS
101: LRRALDQFSS LQSDDGCWPG DFSGIMFIMP GLIFALYVTR SLNTVVTAEH RREICRYIHN HQNEDGGWGT LILGSSSMFG TCSNYITLRL LGEKLDGNTA
201: LAKGRGWISS HGGATLVPQW GKIWLSILGV YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGRKFVGPI TPTILAIRKE IYDMPYDKID
301: WGLSRNACAK EDLVCPRTTL QNAVWTSLYK CVEPVLSSWP INKLRDRALR NLMEHIHYED DNTQYLCICS VNKALNMVCC WAEDPSSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TDLVSEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWTVSDTTAE ALKAVLLLSK
501: ISRNIVGDPI ERERVHDAVD CLLSFVNKDG TFSTYECKRT SAWIEILNPC ESFPNMIVDH PYPECTSSVL QALILFKELH YGYRTKEIEK CIRDAATFIE
601: SRQGEDGSWL GTWGVCFTYG AFFSVKALVA AGRTYESSSS IRKGCHFVLS KQLSTGGWGE SHVSNETKVY VNIEGDRAHA VNTAWAMLTL IYAGQMERDP
701: TPLHRAAKEL INMQMDTGEF PQQEHVGCFN CSLFFNYPNY RNLFPIWALG EYRRRLCLKS TGGCAPSS
101: LRRALDQFSS LQSDDGCWPG DFSGIMFIMP GLIFALYVTR SLNTVVTAEH RREICRYIHN HQNEDGGWGT LILGSSSMFG TCSNYITLRL LGEKLDGNTA
201: LAKGRGWISS HGGATLVPQW GKIWLSILGV YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGRKFVGPI TPTILAIRKE IYDMPYDKID
301: WGLSRNACAK EDLVCPRTTL QNAVWTSLYK CVEPVLSSWP INKLRDRALR NLMEHIHYED DNTQYLCICS VNKALNMVCC WAEDPSSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TDLVSEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWTVSDTTAE ALKAVLLLSK
501: ISRNIVGDPI ERERVHDAVD CLLSFVNKDG TFSTYECKRT SAWIEILNPC ESFPNMIVDH PYPECTSSVL QALILFKELH YGYRTKEIEK CIRDAATFIE
601: SRQGEDGSWL GTWGVCFTYG AFFSVKALVA AGRTYESSSS IRKGCHFVLS KQLSTGGWGE SHVSNETKVY VNIEGDRAHA VNTAWAMLTL IYAGQMERDP
701: TPLHRAAKEL INMQMDTGEF PQQEHVGCFN CSLFFNYPNY RNLFPIWALG EYRRRLCLKS TGGCAPSS
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
Arabidopsis Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.