Factsheet for TraesCS6D01G099900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G019940.2	Barley	nucleus	91.26	47.96
Os02t0140400-01	Rice	cytosol	84.95	40.79
Os02t0140200-01	Rice	mitochondrion, plasma membrane, vacuole	82.52	34.34
KXG29446	Sorghum	endoplasmic reticulum, extracellular	84.47	27.06
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	98.54	26.26
TraesCS6B01G139500.1	Wheat	mitochondrion	97.57	26.17
TraesCS7D01G173600.1	Wheat	cytosol	67.48	25.88
TraesCS6D01G100000.1	Wheat	mitochondrion	92.72	24.87
Os11t0562100-01	Rice	plasma membrane	81.07	21.92
TraesCS7D01G233100.2	Wheat	mitochondrion	71.36	19.57
TraesCS6D01G006500.1	Wheat	cytosol	56.31	17.39
TraesCS4D01G000600.2	Wheat	mitochondrion	59.71	16.31
Zm00001d050625_P001	Maize	mitochondrion	52.43	16.27
VIT_10s0003g03550.t01	Wine grape	extracellular	7.77	16.0
TraesCS5D01G006600.1	Wheat	cytosol	58.74	15.92
TraesCS2D01G387000.1	Wheat	cytosol, plastid	59.71	15.89
TraesCS6D01G099400.2	Wheat	cytosol	60.68	15.7
TraesCS5D01G011800.1	Wheat	mitochondrion	57.77	15.68
TraesCS6D01G098800.1	Wheat	mitochondrion	57.77	15.56
TraesCS7D01G004000.1	Wheat	cytosol	57.28	15.55
TraesCS5D01G006700.1	Wheat	cytosol	57.28	15.53
EES04501	Sorghum	cytosol	50.97	14.21
TraesCS6D01G098600.1	Wheat	cytosol	58.25	14.13
Os02t0140500-00	Rice	mitochondrion	2.43	5.62
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	0.49	0.44
TraesCS7D01G001800.3	Wheat	mitochondrion	0.0	0.0
HORVU6Hr1G019760.1	Barley	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G099900.1	EnsemblPlantsGene:TraesCS6D01G099900	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	PFAM:PF13243
ScanProsite:PS01074	SUPFAM:SSF48239	MapMan:9.1.4.3	:	:	:

Description

No Description!

Coordinates

chr6D:-:62897019..62898536

Molecular Weight (calculated)

23447.9 Da

IEP (calculated)

7.467

GRAVY (calculated)

-0.305

Length

206 amino acids

Sequence
(BLAST)

001: MIVDHPYPEC TSSVLQALML FKELHYGYRT KEIEKCIRDA ATFIESRQGE DGSWLGTWGV CFTYGAFFSV KALVAAGRTY ESSSSIRKGC HFILSKQLST
101: GGWGESHVSN ETKVYVNIEG DRAHAVNTAW AMLTLIYAGQ MERDPTPLHR AAKELINMQM DTGEFPQQEH VGCFNCSLFF NYPNYRNLFP IWALGEYRRR
201: LCSKNS

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.