Factsheet for TraesCS6D01G098600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G138500.1	Wheat	cytosol	81.51	96.11
TraesCS6D01G098800.1	Wheat	mitochondrion	85.75	95.16
Os02t0139500-02	Rice	cytosol	34.39	82.49
GSMUA_Achr7P15790_001	Banana	cytosol	53.36	74.63
TraesCS2D01G387000.1	Wheat	cytosol, plastid	67.14	73.64
TraesCS6D01G099400.2	Wheat	cytosol	68.55	73.12
KRH74134	Soybean	endoplasmic reticulum	63.13	70.81
VIT_11s0065g00640.t01	Wine grape	cytosol	62.66	70.0
TraesCS5D01G011800.1	Wheat	mitochondrion	61.96	69.3
AT2G07050.1	Thale cress	cytosol	61.6	68.91
TraesCS5D01G006600.1	Wheat	cytosol	61.6	68.82
PGSC0003DMT400073861	Potato	mitochondrion	39.81	68.56
Bra013167.1-P	Field mustard	cytosol	61.6	68.19
CDY50938	Canola	cytosol	61.25	68.15
CDX93093	Canola	cytosol	61.48	67.97
TraesCS5D01G006700.1	Wheat	cytosol	60.78	67.89
CDX85104	Canola	cytosol	60.78	67.54
CDX77512	Canola	cytosol	61.6	67.31
VIT_09s0054g01250.t01	Wine grape	cytosol	23.44	67.0
VIT_09s0018g00630.t01	Wine grape	cytosol	59.72	66.89
VIT_09s0054g01550.t01	Wine grape	cytosol	59.48	66.62
VIT_09s0054g01180.t01	Wine grape	cytosol	50.29	66.41
VIT_09s0054g01120.t01	Wine grape	cytosol	54.77	65.31
Solyc04g070980.2.1	Tomato	plastid	57.83	64.61
VIT_09s0054g01110.t01	Wine grape	cytosol	59.95	63.94
Solyc04g050670.1.1	Tomato	cytosol	11.66	61.11
TraesCS7D01G173600.1	Wheat	cytosol	38.16	60.34
Bra014952.1-P	Field mustard	cytosol	59.25	59.6
TraesCS7D01G233100.2	Wheat	mitochondrion	52.41	59.25
TraesCS6D01G099900.1	Wheat	cytosol	14.13	58.25
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.48	55.88
TraesCS6D01G100000.1	Wheat	mitochondrion	49.94	55.21
TraesCS6D01G006500.1	Wheat	cytosol	42.99	54.72
TraesCS4D01G000600.2	Wheat	mitochondrion	47.94	53.98
TraesCS7D01G004000.1	Wheat	cytosol	48.17	53.89
VIT_09s0054g01090.t01	Wine grape	cytosol	60.19	53.85
TraesCS7D01G001800.3	Wheat	mitochondrion	27.44	53.81
VIT_04s0008g03000.t01	Wine grape	cytosol	18.37	50.81
VIT_04s0008g02980.t01	Wine grape	mitochondrion	8.95	48.72
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	12.84	48.44
VIT_04s0008g02990.t01	Wine grape	cytosol	5.18	46.81
PGSC0003DMT400048787	Potato	cytosol	3.06	44.83
PGSC0003DMT400062376	Potato	extracellular, vacuole	9.31	40.93
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	18.96	37.44
CDY29789	Canola	cytosol	3.89	33.67

Protein Annotations

EnsemblPlants:TraesCS6D01G098600.1	EnsemblPlantsGene:TraesCS6D01G098600	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27
PFAM:PF13243	PFAM:PF13249	SEG:seg	SUPFAM:SSF48239	TIGR:cd02892	TIGRFAMs:TIGR01787
MapMan:9.1.4.3	MapMan:9.1.5.3	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:62118894..62128833

Molecular Weight (calculated)

95869.3 Da

IEP (calculated)

7.186

GRAVY (calculated)

-0.335

Length

849 amino acids

Sequence
(BLAST)

001: MWRLRIGEEA GGEPWLRTTN AHAGRQVWEF DPAAGGGALD GVDDARREYS GRRHQLKHSA DRLMRLQGQR KPRSGTQGAR LGRPWTRVES IRIRGEPTAH
101: FCTSVPLRLC RSRRGSALPR RRRDDEPRRR LYVLAADGPL HGFWALSHQR FAELGAPKLD VPGIKLQEHE DVTEEAVLTS LKRAIGQLSA LQAHDGHWPG
201: DIAGPMFLLP GLVIALHSTG ALNTVLSSEH QKEIRRYLYN HQNKDGGWGL HIEGPSTMFG SVLNYVTLRL LGEGSDSEDG AIQLAQNWIL DHGGATFTTS
301: WGKFWLSVLG VFDWSGNNPL LPELWLLPYC LPFHPGRMWS HCRMVYFPMS YIYGKRFVGP ITPTVLNLRK ELYKVPYDEI DWDKARNQCA KEDLYCPHPL
401: GQDILWTTLH KFVEPVLSHW PGSKLREKAL KNAMQHIHYE DENTQYVCSG AVGKVLNMLC CWIEDPNSEE FKLHIPRIYD YLWVAEDGMK MQGYNGSQLW
501: DTAFTVEAIL ATELTEEFCP TLKLAHDYIK NSQILHDCHG DLSDWYRHIS KGAWTFSTAD HAWPVSDCTA VGLKASLLLS KISPEMVGVP IEANRLYDAV
601: NCLLSWMNGN GGFASYELTR SYAWLEFLNP SEIFGDIMID HPVVECTSAV IQALVAFRKH YPEHRREEID KCIHKADNFI LSIQRSDGSW YGSWGICFTH
701: GAWSAVRGLV AAGRTFKNCP AIRKACGFLL SKEVPSGGWG ESYLSCRDKV YTELEGRRPH VVNTSWAMLA LIDAGQAERD PGPLHRAAKV LINLQLEDGE
801: FPQQEIIGIF ARNCAITYSQ YRNIFPIWAL GEYRCRVLGS GSPEGHGDA

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.