Factsheet for TraesCS7D01G173600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099900.1	Wheat	cytosol	25.88	67.48
TraesCS7D01G233100.2	Wheat	mitochondrion	88.27	63.12
HORVU7Hr1G047800.10	Barley	mitochondrion	73.56	56.83
OQU80191	Sorghum	cytosol, mitochondrion	76.54	54.58
OQU80182	Sorghum	mitochondrion	72.25	53.3
Zm00001d052971_P005	Maize	mitochondrion	74.67	53.04
EES14558	Sorghum	cytosol	73.93	52.37
KXG24790	Sorghum	cytosol, mitochondrion	76.72	51.95
KXG28793	Sorghum	mitochondrion	73.18	51.31
TraesCS4D01G000600.2	Wheat	mitochondrion	66.11	47.08
TraesCS6D01G100000.1	Wheat	mitochondrion	67.04	46.88
TraesCS6D01G006500.1	Wheat	cytosol	58.1	46.78
TraesCS5D01G006600.1	Wheat	cytosol	60.34	42.63
TraesCS6D01G098800.1	Wheat	mitochondrion	59.96	42.09
TraesCS5D01G011800.1	Wheat	mitochondrion	59.22	41.9
TraesCS5D01G006700.1	Wheat	cytosol	58.1	41.05
TraesCS6D01G099400.2	Wheat	cytosol	59.59	40.2
TraesCS2D01G387000.1	Wheat	cytosol, plastid	57.73	40.05
TraesCS6D01G098600.1	Wheat	cytosol	60.34	38.16
TraesCS7D01G004000.1	Wheat	cytosol	52.33	37.02
TraesCS7D01G001800.3	Wheat	mitochondrion	29.24	36.26
VIT_10s0003g03550.t01	Wine grape	extracellular	4.66	25.0
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	3.17	7.56
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	1.68	4.66

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS7D01G173600
EnsemblPlants:TraesCS7D01G173600.1	TIGR:cd02892	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:126014914..126027892

Molecular Weight (calculated)

61606.9 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.194

Length

537 amino acids

Sequence
(BLAST)

001: MFLQMKVIGL YEWSGNNSII PELWLVPHIL PIHPGRFWCF CRLIYMPMSY LYGKKFVGPI TPTILELRKE LYSVPYHEVD WNKARDTCAK EDLRYPRSLL
101: QNVIWTCLNK IVEPALNCWP VNKLRDKALK NLMKHMHYED ESTKYIGICP IDKALGMICC WIDDPNSDAF KLHLPRIYDY LWLAEDGMKA QVYDGCQSWE
201: IAFIVQAYCS TDLVNEFAPT LRKAHEFIKR SQILEDHPDS EAYYRHRSKG SWTLSTADNG WSVSDCTAEA LKALLLLSTI SPNLVGEPMK GERLYDAVDC
301: VLSFMNKDGT FSTYECKRTT SMLEVLNPSE SFLNIIVDYA SVECTSSVLQ ALIMFREVYP GYREEEIRKC IKNASKFIEN SQRKDGSWFG TWGICFTYGT
401: FFAVKGLVAS GRTYENSFSI SKACEFLLSK QLSTGGWGET YLSSETESYM SAATPHAVNT AWAMLALIDA GQVERDPAPL YHAAKELINM QLETGEFPQQ
501: EHVGCFNCSF YFNYGNYSNL YPIWALGELR RRLLAKN

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.