Factsheet for TraesCS7D01G173700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	52.89	61.66
TraesCS7D01G001800.3	Wheat	mitochondrion	76.0	39.49
TraesCS7D01G233100.2	Wheat	mitochondrion	80.89	24.23
OQU80182	Sorghum	mitochondrion	69.78	21.57
TraesCS6D01G006500.1	Wheat	cytosol	61.33	20.69
OQU80191	Sorghum	cytosol, mitochondrion	68.89	20.58
KXG28793	Sorghum	mitochondrion	68.44	20.1
KXG24790	Sorghum	cytosol, mitochondrion	70.67	20.05
EES14558	Sorghum	cytosol	66.67	19.79
Zm00001d052971_P005	Maize	mitochondrion	65.78	19.58
TraesCS6D01G100000.1	Wheat	mitochondrion	66.22	19.4
TraesCS4D01G000600.2	Wheat	mitochondrion	58.22	17.37
TraesCS5D01G011800.1	Wheat	mitochondrion	50.22	14.89
TraesCS5D01G006700.1	Wheat	cytosol	50.22	14.87
TraesCS5D01G006600.1	Wheat	cytosol	49.33	14.61
TraesCS6D01G099400.2	Wheat	cytosol	51.11	14.45
TraesCS6D01G098800.1	Wheat	mitochondrion	47.11	13.86
TraesCS2D01G387000.1	Wheat	cytosol, plastid	46.67	13.57
TraesCS6D01G098600.1	Wheat	cytosol	48.44	12.84
TraesCS7D01G004000.1	Wheat	cytosol	42.22	12.52
VIT_10s0003g03550.t01	Wine grape	extracellular	4.89	11.0
TraesCS7D01G173600.1	Wheat	cytosol	7.56	3.17
TraesCS6D01G099900.1	Wheat	cytosol	0.44	0.49

Protein Annotations

EnsemblPlants:TraesCS7D01G173700.1	EnsemblPlantsGene:TraesCS7D01G173700	Gene3D:1.50.10.20	InterPro:SQ_cyclase_N	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF14	PFAM:PF13249	SEG:seg	SUPFAM:SSF48239	MapMan:35.1	:

Description

No Description!

Coordinates

chr7D:-:126048810..126050809

Molecular Weight (calculated)

25475.7 Da

IEP (calculated)

8.503

GRAVY (calculated)

-0.316

Length

225 amino acids

Sequence
(BLAST)

001: MWRLKVAEGG GPWLRSVNNF LGRAVWEFDP DHGTPEERAE VERVRREFTD RRLEKRESQD LLMRMQYAKQ KGHQVDLPAI KLVHSAEVTE DTILTSLRRA
101: LTRHSALQAD DGHWAGDFSG IMFIMPILNE DGGWGTQVLG TSTMFGSCLN YVTLRLLGEV DNESLTKGRD WILSRGSAAA IPQWGKIWLS VCHRNTNNLV
201: CGIYMKINVA SLSIMHGRVL KPPTF

Best Arabidopsis Sequence Match ( AT1G78960.1 )
(BLAST)

001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL

Arabidopsis Description

LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.