Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0286800-01 | Rice | cytosol | 74.06 | 65.34 |
| OQU91432 | Sorghum | cytosol | 74.06 | 62.22 |
| TraesCS7D01G233100.2 | Wheat | mitochondrion | 69.57 | 61.78 |
| Zm00001d013798_P001 | Maize | mitochondrion | 69.57 | 61.62 |
| TraesCS7D01G173700.1 | Wheat | cytosol, mitochondrion | 20.69 | 61.33 |
| TraesCS7D01G173600.1 | Wheat | cytosol | 46.78 | 58.1 |
| TraesCS6D01G100000.1 | Wheat | mitochondrion | 66.42 | 57.68 |
| TraesCS6D01G099900.1 | Wheat | cytosol | 17.39 | 56.31 |
| TraesCS4D01G000600.2 | Wheat | mitochondrion | 63.57 | 56.23 |
| TraesCS7D01G001800.3 | Wheat | mitochondrion | 34.18 | 52.66 |
| TraesCS5D01G011800.1 | Wheat | mitochondrion | 55.17 | 48.48 |
| TraesCS5D01G006600.1 | Wheat | cytosol | 55.17 | 48.42 |
| TraesCS5D01G006700.1 | Wheat | cytosol | 55.17 | 48.42 |
| TraesCS6D01G098800.1 | Wheat | mitochondrion | 54.27 | 47.32 |
| TraesCS6D01G099400.2 | Wheat | cytosol | 55.77 | 46.73 |
| TraesCS2D01G387000.1 | Wheat | cytosol, plastid | 53.82 | 46.38 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 50.37 | 44.27 |
| TraesCS6D01G098600.1 | Wheat | cytosol | 54.72 | 42.99 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 5.4 | 36.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G006500.1 | EnsemblPlantsGene:TraesCS6D01G006500 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg | SUPFAM:SSF48239 |
| TIGR:cd02892 | TMHMM:TMhelix | MapMan:9.1.4.3 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:2855162..2872133
Molecular Weight (calculated)
76457.5 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.264
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVGEGG SALLRTRNNF LGREVWEFDP DAGTPEERAQ VERLRREFTE HRFHRPRESD DLLMRMQYVK QNGPEAILPV TKLKNYGEVM EDIILDALRR
101: VLITYSTLQA HDGHWPGGFS GILFIMPLMI FALYVTGSLH MVISPEHIRE ICRYIYNIQN EDGGWSTHIL GPSSMFGSCV NYVTLRILGE ELDGNEALYK
201: GRAWILSHGS ATASPQWAKI WLSVIGMYDW SGNNPVIPEL WSVPHLLPIH PGKFWCFCRM VYMPMAYIYG KKFVGPITPT ILALRDELYN KPYSEINWNM
301: ARSSCAKVLN MICCWIEDPN SYAFKRHLPR IHDFLWISED GMKAKVYVGC QSWETALIAQ AFCSTKLAKE FAPVLRKAHG FLKAAQVTQN FPTYNSYYRE
401: RSKGAWTLSN GENGWPIADT TAEAIKALLL LSKYSPSLVG DPIEEQRFYD AVDCLLSYVN KDGTLSSAEC KRTTPWVEIL NPSESFRNII VDYPYVECTS
501: SLVQALILFR NSYPEYRCEE IEECIKKGTL FIEKQQRTDG SWYGTWGVCF TYASFFATKG LVAAGRTYEN SVTIRKACSF LLAKQLSSGG WGENYLGCET
601: EVERDPTPMY RAAKELINLQ TERGEFPQQE TVGNFNSSLY FNYSNYRNLF PIWALGEFHR RLVGNKN
101: VLITYSTLQA HDGHWPGGFS GILFIMPLMI FALYVTGSLH MVISPEHIRE ICRYIYNIQN EDGGWSTHIL GPSSMFGSCV NYVTLRILGE ELDGNEALYK
201: GRAWILSHGS ATASPQWAKI WLSVIGMYDW SGNNPVIPEL WSVPHLLPIH PGKFWCFCRM VYMPMAYIYG KKFVGPITPT ILALRDELYN KPYSEINWNM
301: ARSSCAKVLN MICCWIEDPN SYAFKRHLPR IHDFLWISED GMKAKVYVGC QSWETALIAQ AFCSTKLAKE FAPVLRKAHG FLKAAQVTQN FPTYNSYYRE
401: RSKGAWTLSN GENGWPIADT TAEAIKALLL LSKYSPSLVG DPIEEQRFYD AVDCLLSYVN KDGTLSSAEC KRTTPWVEIL NPSESFRNII VDYPYVECTS
501: SLVQALILFR NSYPEYRCEE IEECIKKGTL FIEKQQRTDG SWYGTWGVCF TYASFFATKG LVAAGRTYEN SVTIRKACSF LLAKQLSSGG WGENYLGCET
601: EVERDPTPMY RAAKELINLQ TERGEFPQQE TVGNFNSSLY FNYSNYRNLF PIWALGEFHR RLVGNKN
001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.