Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0286400-00 | Rice | cytosol | 7.41 | 76.71 |
| Zm00001d013798_P001 | Maize | mitochondrion | 73.81 | 74.1 |
| TraesCS6D01G006500.1 | Wheat | cytosol | 65.34 | 74.06 |
| OQU91432 | Sorghum | cytosol | 76.98 | 73.3 |
| Os11t0285000-01 | Rice | plasma membrane | 65.48 | 65.13 |
| Os06t0483200-02 | Rice | cytosol, mitochondrion, peroxisome, plastid | 16.01 | 62.69 |
| Os11t0562100-01 | Rice | plasma membrane | 60.19 | 59.71 |
| Os02t0140400-01 | Rice | cytosol | 33.86 | 59.67 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 37.7 | 57.58 |
| Os02t0139700-01 | Rice | cytosol | 56.48 | 56.26 |
| Os02t0139500-02 | Rice | cytosol | 25.66 | 54.8 |
| Os11t0189600-01 | Rice | cytosol, mitochondrion | 52.78 | 52.57 |
| Os02t0140500-00 | Rice | mitochondrion | 5.95 | 50.56 |
| Os08t0223900-00 | Rice | cytosol | 48.41 | 46.62 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.76 | 36.0 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:4350295 | MapMan:9.1.4.3 | ProteinID:BAF28067.1 | ProteinID:BAT13622.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016853 | GO:GO:0016866 | EnsemblPlantsGene:Os11g0286800 | EnsemblPlants:Os11t0286800-01 | PFAM:PF13243 |
| PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | UniProt:Q0IT98 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0000DD9BD9 | RefSeq:XP_015617477.1 | : | : | : | : |
Description
oxidosqualene cyclase 10Squalene cyclase domain containing protein. (Os11t0286800-01);Similar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cycloartenol synthase. (Os11t0286800-03);Similar to Cycloartenol synthase. (Os11t0286800-04)
Coordinates
chr11:-:10352224..10376610
Molecular Weight (calculated)
86849.1 Da
IEP (calculated)
7.732
GRAVY (calculated)
-0.262
Length
756 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKFGEGA SNPLLRSSNG FLGRETWEFD PNGGSPEEHA VVERLRRDFT RNRFTQRECS DLLMRMQFAK ENQVYSKHEV SNLKDSSEVT EEVLLTSLRR
101: VLDQYSSLQA PDGYWPGGYS GILFILPLMI FALHVTKSLN DVLSSEHIRE ICRYIYNIQN EDGGWSTHTL GPSSMFGSCV NYATLRLLGE VLDEHNDGLS
201: KGRAWILSHG SATVAPQWAK IYLSVIGVYD WSGNNPIIPE LWLLPHFLPI HPGRFWCFCR MVYMPMSYIY AKRFIGPITP TILALREELY DVPYNKINWN
301: NARISCCKDD IIYPPSWFQN IAMASLHKFM EPLFNMWPMN KLRKRALTNL MDHIHYEDEN SNYVGLCPIN KVLNMICCWI ENPNSNAFRR HVPRIHDFLW
401: LAEDGMKSKV YVGSRCWDTA LIVQAYCSTG LTQEFSETIK KAHDFIKNAQ VTKNCPNYKR YYRERSKGSW TLSNGENGWP IADTLAECLK AVLLLSKIPP
501: TQVGDPIQEQ RLYDAIDCLL SYVNKDGTLS SAESKRTTPW VEFINPSESF RNIIVDYPYV ECTSSLIQAL ILFKGVHPGY RREEIDRIIK NGVLFIEKKQ
601: KNDGSWYGSW AVCFTYATFF AIKGLVAAGR TFQNSLSIRK ACNFLLSKQL STGGWGEDYL GCQVEEYIDS GRPHVVHTAW GMLGLIYAGQ VELDPAPLYR
701: AAKELINMQL ETGEFPQQEI LGSFNSSLFF NYTNYRNLFP IWALGEFHRR LLAKRA
101: VLDQYSSLQA PDGYWPGGYS GILFILPLMI FALHVTKSLN DVLSSEHIRE ICRYIYNIQN EDGGWSTHTL GPSSMFGSCV NYATLRLLGE VLDEHNDGLS
201: KGRAWILSHG SATVAPQWAK IYLSVIGVYD WSGNNPIIPE LWLLPHFLPI HPGRFWCFCR MVYMPMSYIY AKRFIGPITP TILALREELY DVPYNKINWN
301: NARISCCKDD IIYPPSWFQN IAMASLHKFM EPLFNMWPMN KLRKRALTNL MDHIHYEDEN SNYVGLCPIN KVLNMICCWI ENPNSNAFRR HVPRIHDFLW
401: LAEDGMKSKV YVGSRCWDTA LIVQAYCSTG LTQEFSETIK KAHDFIKNAQ VTKNCPNYKR YYRERSKGSW TLSNGENGWP IADTLAECLK AVLLLSKIPP
501: TQVGDPIQEQ RLYDAIDCLL SYVNKDGTLS SAESKRTTPW VEFINPSESF RNIIVDYPYV ECTSSLIQAL ILFKGVHPGY RREEIDRIIK NGVLFIEKKQ
601: KNDGSWYGSW AVCFTYATFF AIKGLVAAGR TFQNSLSIRK ACNFLLSKQL STGGWGEDYL GCQVEEYIDS GRPHVVHTAW GMLGLIYAGQ VELDPAPLYR
701: AAKELINMQL ETGEFPQQEI LGSFNSSLFF NYTNYRNLFP IWALGEFHRR LLAKRA
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.