Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G099900.1 | Wheat | cytosol | 40.79 | 84.95 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 89.28 | 77.37 |
| TraesCS4A01G498900.1 | Wheat | cytosol | 15.38 | 71.74 |
| HORVU6Hr1G019940.2 | Barley | nucleus | 54.31 | 59.44 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 85.08 | 56.77 |
| Os11t0562100-01 | Rice | plasma membrane | 85.78 | 48.29 |
| TraesCS6A01G111400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 82.98 | 46.05 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 82.28 | 45.96 |
| TraesCS6D01G100000.1 | Wheat | mitochondrion | 81.12 | 45.31 |
| Zm00001d050625_P001 | Maize | mitochondrion | 67.37 | 43.52 |
| EES04501 | Sorghum | cytosol | 65.27 | 37.89 |
| Os11t0285000-01 | Rice | plasma membrane | 64.8 | 36.58 |
| Os11t0286800-01 | Rice | cytosol | 59.67 | 33.86 |
| Os02t0139700-01 | Rice | cytosol | 56.41 | 31.88 |
| Os11t0189600-01 | Rice | cytosol, mitochondrion | 53.38 | 30.17 |
| Os08t0223900-00 | Rice | cytosol | 51.28 | 28.03 |
| HORVU6Hr1G020020.1 | Barley | mitochondrion | 29.84 | 25.25 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 5.36 | 23.0 |
| Os02t0139500-02 | Rice | cytosol | 10.96 | 13.28 |
| Os02t0140500-00 | Rice | mitochondrion | 0.93 | 4.49 |
| Os06t0483200-02 | Rice | cytosol, mitochondrion, peroxisome, plastid | 0.93 | 2.07 |
| HORVU0Hr1G022520.1 | Barley | mitochondrion | 1.17 | 1.5 |
| Os11t0286400-00 | Rice | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0140400-01 | EnsemblPlantsGene:Os02g0140400 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 |
| PFAM:PF13243 | ProteinID:BAF07767.1 | ProteinID:BAS76916.1 | ScanProsite:PS01074 | SUPFAM:SSF48239 | TIGRFAMs:TIGR01787 |
| UniParc:UPI0000DF0540 | UniProt:Q0E421 | MapMan:9.1.4.3 | : | : | : |
Description
oxidosqualene cyclase 4Similar to Beta-amyrin synthase. (Os02t0140400-01)
Coordinates
chr2:-:2161770..2166648
Molecular Weight (calculated)
48702.4 Da
IEP (calculated)
5.416
GRAVY (calculated)
-0.256
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: GGELWIGSWH IHYEDENTQY LCICSVNKAL NMVCCWAEDP NSDAFKQHLA RVPDFLWLSE DGMKAQVYDG CQSWETAFII QAFCATDLVN EYASTVQRAH
101: EFLKNSQVVR NHPGDQSYWH RHRSKGSWTL SSADNGWAVS DTTAEALKAV LLLTKISINV VGDPIERERL HDAVDCLLSF VNKDGTVSTY ECKRTSTWIE
201: ILNPCESFSN MVVDYPYPEC TSSVLQALVL FKELCPGYRT EEIEKCVRNA TMFIENTQGE DGSWLGTWGV CFTYGAFFSV KGLIAAGRTY ENSSSIRKAC
301: DFIMSKQLNT GGWGESHVSN ETKISPLLFF YNIKQVYVNI KGDHAHAVNT AWAMLTLIYA GQMERDPAPL HCAAKELINM QLETGEFPQQ EHVGCFNCSL
401: FFNYPNYRNL FPIWALGEYC NRLRSERRA
101: EFLKNSQVVR NHPGDQSYWH RHRSKGSWTL SSADNGWAVS DTTAEALKAV LLLTKISINV VGDPIERERL HDAVDCLLSF VNKDGTVSTY ECKRTSTWIE
201: ILNPCESFSN MVVDYPYPEC TSSVLQALVL FKELCPGYRT EEIEKCVRNA TMFIENTQGE DGSWLGTWGV CFTYGAFFSV KGLIAAGRTY ENSSSIRKAC
301: DFIMSKQLNT GGWGESHVSN ETKISPLLFF YNIKQVYVNI KGDHAHAVNT AWAMLTLIYA GQMERDPAPL HCAAKELINM QLETGEFPQQ EHVGCFNCSL
401: FFNYPNYRNL FPIWALGEYC NRLRSERRA
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.