Factsheet for Os02t0139500-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01250.t01	Wine grape	cytosol	39.27	46.8
VIT_04s0008g03000.t01	Wine grape	cytosol	38.14	43.97
TraesCS6B01G138500.1	Wheat	cytosol	82.49	40.56
TraesCS6A01G110200.1	Wheat	mitochondrion	81.92	38.46
TraesCS6D01G098800.1	Wheat	mitochondrion	82.2	38.04
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	77.12	36.06
Os02t0139700-01	Rice	cytosol	77.12	35.97
VIT_09s0054g01180.t01	Wine grape	cytosol	64.41	35.46
GSMUA_Achr7P15790_001	Banana	cytosol	59.04	34.43
TraesCS6D01G098600.1	Wheat	cytosol	82.49	34.39
KRH74134	Soybean	endoplasmic reticulum	70.62	33.03
AT2G07050.1	Thale cress	cytosol	70.62	32.94
VIT_09s0018g00630.t01	Wine grape	cytosol	70.34	32.85
VIT_11s0065g00640.t01	Wine grape	cytosol	70.06	32.63
VIT_09s0054g01550.t01	Wine grape	cytosol	69.77	32.59
Os11t0189600-01	Rice	cytosol, mitochondrion	69.77	32.54
CDY50938	Canola	cytosol	70.06	32.5
CDX77512	Canola	cytosol	71.19	32.43
Bra013167.1-P	Field mustard	cytosol	69.77	32.2
CDX85104	Canola	cytosol	69.49	32.2
VIT_09s0054g01120.t01	Wine grape	cytosol	64.69	32.16
CDX93093	Canola	cytosol	69.49	32.03
VIT_09s0054g01110.t01	Wine grape	cytosol	70.9	31.53
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	16.95	31.09
Solyc04g070980.2.1	Tomato	plastid	63.28	29.47
Bra014952.1-P	Field mustard	cytosol	65.82	27.61
VIT_09s0054g01090.t01	Wine grape	cytosol	69.49	25.92
Os11t0286800-01	Rice	cytosol	54.8	25.66
Os11t0562100-01	Rice	plasma membrane	55.08	25.59
Os11t0285000-01	Rice	plasma membrane	54.8	25.53
Os08t0223900-00	Rice	cytosol	54.52	24.59
CDY29789	Canola	cytosol	6.21	22.45
PGSC0003DMT400073861	Potato	mitochondrion	30.79	22.11
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	25.99	21.4
PGSC0003DMT400062376	Potato	extracellular, vacuole	8.19	15.03
Solyc04g050670.1.1	Tomato	cytosol	6.78	14.81
Os02t0140200-01	Rice	mitochondrion, plasma membrane, vacuole	18.64	13.33
Os02t0140400-01	Rice	cytosol	13.28	10.96
Os02t0140500-00	Rice	mitochondrion	1.13	4.49
VIT_04s0008g02980.t01	Wine grape	mitochondrion	1.98	4.49
Os11t0286400-00	Rice	cytosol	0.85	4.11
PGSC0003DMT400048787	Potato	cytosol	0.56	3.45
VIT_04s0008g02990.t01	Wine grape	cytosol	0.85	3.19
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.28	1.47

Protein Annotations

EnsemblPlants:Os02t0139500-02	EnsemblPlantsGene:Os02g0139500	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	PFAM:PF13249
ProteinID:BAS76905.1	SUPFAM:SSF48239	TIGRFAMs:TIGR01787	UniParc:UPI0000DF053B	UniProt:A0A0N7KEN4	MapMan:9.1.4.3

Description

oxidosqualene cyclase 1Similar to Beta-amyrin synthase. (Os02t0139500-01);Similar to Cycloartenol synthase. (Os02t0139500-02)

Coordinates

chr2:-:2110965..2118950

Molecular Weight (calculated)

40754.2 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.175

Length

354 amino acids

Sequence
(BLAST)

001: FTRSNPSKLE IPGIKLGEDE DVTEEAVLTS LKRAIRRYST LQAHDGHWPG DYAGPMFLLP GLVIVLHVTG ALNTVLSTEH QKEIRRYLYN HQNEDGGWGL
101: HIEGTSTMFC TVLTYVTLRL LGDESDGGDG AMVIARNWIL DHGGATFTTS WGKFWLSVLG VFDWSGNNPL LPELWMLPYF LPFHPGRIWS HCRMVYLPMS
201: YIYGKKFVGP ITPIVLTLRK ELYNIPYDDI NWDKARNQCA KEDLYYRHPL GQDILWATLY KFVEPVLSHW PGSKLREKAL KNAMQHIHYE DENTRYICSG
301: AVQKVLNMLS CWIENPNSEA FRFHIPRVHD YLWVAEDGMK MQVLISYLGL MAIF

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.