Factsheet for Os11t0562100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0140400-01	Rice	cytosol	48.29	85.78
Os02t0140200-01	Rice	mitochondrion, plasma membrane, vacuole	53.28	82.02
KXG29446	Sorghum	endoplasmic reticulum, extracellular	68.5	81.18
TraesCS6D01G099900.1	Wheat	cytosol	21.92	81.07
TraesCS6D01G100000.1	Wheat	mitochondrion	78.22	77.6
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	77.95	76.84
TraesCS6B01G139500.1	Wheat	mitochondrion	77.43	76.82
Zm00001d050625_P001	Maize	mitochondrion	66.14	75.9
HORVU6Hr1G020020.1	Barley	mitochondrion	49.48	74.36
Os02t0140500-00	Rice	mitochondrion	8.4	71.91
EES04501	Sorghum	cytosol	68.5	70.64
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	17.06	67.36
TraesCS4A01G498900.1	Wheat	cytosol	8.01	66.3
Os11t0285000-01	Rice	plasma membrane	63.12	63.29
HORVU6Hr1G019940.2	Barley	nucleus	31.63	61.48
Os11t0286800-01	Rice	cytosol	59.71	60.19
HORVU0Hr1G022520.1	Barley	mitochondrion	25.85	58.98
Os11t0286400-00	Rice	cytosol	5.38	56.16
Os02t0139700-01	Rice	cytosol	55.91	56.13
Os02t0139500-02	Rice	cytosol	25.59	55.08
Os11t0189600-01	Rice	cytosol, mitochondrion	54.2	54.41
Os08t0223900-00	Rice	cytosol	49.34	47.9
HORVU6Hr1G019760.1	Barley	mitochondrion	4.07	41.89
VIT_10s0003g03550.t01	Wine grape	extracellular	4.59	35.0

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:4350734	MapMan:9.1.4.3	ProteinID:BAF28466.1	ProteinID:BAT14482.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	EnsemblPlantsGene:Os11g0562100	EnsemblPlants:Os11t0562100-01	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	UniProt:Q0IS49	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0000DD9C93	RefSeq:XP_015617607.1	SEG:seg	:	:	:

Description

isoarborinol synthase, oxidosqualene cyclase 11Squalene cyclase domain containing protein. (Os11t0562100-01);Similar to cycloartenol synthase. (Os11t0562100-02)

Coordinates

chr11:+:20942418..20959700

Molecular Weight (calculated)

86666.2 Da

IEP (calculated)

6.438

GRAVY (calculated)

-0.273

Length

762 amino acids

Sequence
(BLAST)

001: MWRLKVAQGG GALLRSTNGF AGRAVWEFDP DHGTPEDRAN VERVRRDFTD HRLRRPESAD LLMRMQFARE NNHQRRGDRI PPAVNKLGEK EQVTEETVMA
101: SLRRALDEFS SLQADDGHWP GDLSGAIFIM PVLIFSLYAT GSLDTVISSE HRREICRYIY NHQNEDGGWG MLILGSSTMF ATCLNYVTLR LIGEEPSNEQ
201: LARGHAWIIS HGGATLVPQW GKICLSIIGV YEWSGNNPIF PELWLAPQFL PFHPGKFWGP TRVVYVPMAY LYGKKFVGPI TPTILALREE IYTDPYHTID
301: WAQACNACSK EDLVCPRTLL QNVVWTSLYK WVEPVLGSRP MNKLRERALD RLMEHIHYED ENSQYLCLCP VNKALNMVCC WVEDPNSDSF KRHLARIPDF
401: LWLSEDGMKA QIYDGCQSWE TAFIIQAFCA TDLVNEYGST VRRAHEFMKN SQIMRNHPGD QSYWHRHRSK GSWTLSSADN GWAVSDTTAE ALKAVLLLEK
501: ISSNVVGDPI EIERLHDAVD CLLSFVNKDG TLSTYECKRT YTWIEVLSPC ESFPNIVVDY PFPECTSSVL QALVLFKQLH PSYRIKEIEK CVRNAAMFIE
601: STQGEDGSWL GTWGVCFTYG AFLSVKGLIA AGRTYENSSS IRKACDFILS KQLDTGGWGE SYVSNITKVY VNIKDDQAHA VNTAWAMLAL ICAGQMERDP
701: APLHRAAKEL INMQLETGEF PQQEHVGAFN ACLFFNYPNY RNLFPIWALG EYCRHLHSTR RA

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.