Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G122220.1 | Barley | mitochondrion | 81.03 | 81.03 |
| OQU83221 | Sorghum | cytosol | 78.79 | 78.07 |
| TraesCS5B01G545900.1 | Wheat | cytosol | 74.44 | 77.29 |
| Zm00001d035392_P001 | Maize | cytosol | 23.32 | 75.64 |
| Os02t0139700-01 | Rice | cytosol | 71.41 | 71.41 |
| Os02t0139500-02 | Rice | cytosol | 32.54 | 69.77 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 5.53 | 62.69 |
| CDX85103 | Canola | cytosol | 8.3 | 59.43 |
| Os02t0140500-00 | Rice | mitochondrion | 6.85 | 58.43 |
| Os06t0483200-02 | Rice | cytosol, mitochondrion, peroxisome, plastid | 14.36 | 56.48 |
| Zm00001d035389_P001 | Maize | cytosol, nucleus, peroxisome | 41.77 | 54.37 |
| Os11t0562100-01 | Rice | plasma membrane | 54.41 | 54.2 |
| Os02t0140400-01 | Rice | cytosol | 30.17 | 53.38 |
| Os11t0285000-01 | Rice | plasma membrane | 53.1 | 53.03 |
| Os11t0286800-01 | Rice | cytosol | 52.57 | 52.78 |
| Os11t0286400-00 | Rice | cytosol | 5.01 | 52.05 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 33.6 | 51.52 |
| Os08t0223900-00 | Rice | cytosol | 53.1 | 51.34 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | EntrezGene:9268610 | ProteinID:AAX95229.1 | ProteinID:AAX95231.1 | ProteinID:ABG22398.1 |
| ProteinID:ABG22399.1 | EMBL:AK066327 | ProteinID:BAH95124.1 | ProteinID:BAT13009.1 | ProteinID:EAZ17703.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 | GO:GO:0016866 |
| UniProt:H2KWF1 | EnsemblPlantsGene:Os11g0189600 | EnsemblPlants:Os11t0189600-01 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 |
| PANTHER:PTHR11764 | PANTHER:PTHR11764:SF27 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase |
| TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0000D899EA | RefSeq:XP_015617632.1 | RefSeq:XP_015617633.1 |
| SEG:seg | : | : | : | : | : |
Description
oxidosqualene cyclase 7, parkeol synthaseSimilar to Cycloartenol synthase. (Os11t0189600-01);Similar to cDNA clone:J013062J12, full insert sequence. (Os11t0189600-02)
Coordinates
chr11:+:4522342..4557876
Molecular Weight (calculated)
86131.9 Da
IEP (calculated)
6.642
GRAVY (calculated)
-0.270
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVSEGG SPWLRSVNNL LGRQVWEFDP DLGTPEERAD VEKARREFAE HRFERKHSSD LLMRMQFAKE NCQKLDLLAV KRGEHEDVMG EAVWSSLKRA
101: ISRVCNLQAH DGHWPGDYAG LMFFLPGLII TLHVSGVLNT VLSSEHQKEM RRYIYNHQNE DGGWGLHIEG HSTMLGSSLN YVALRLLGEG PNGGDGCIEN
201: GRNWILDHGG ATFTTSWGKF WLSVLGVFDW SGNNPVPPEL LLLPYQLPFH PGRMSSYIRM VFIPMSYIYG KRFVGPVTPV VLELRSELYN DPYDEIDWNK
301: ARTQCAKEDM YYPRSSKLDM FWSFLHKFIE PVLLRWPGRK LREKALATSM RNVHYEDECT RYICFGGVPK ALNILACWIE DPSSEAFKCH IARVYDYLWI
401: AEDGMKMQIY DGSQVWDAGL TVEALVATDL VKELGPTLKR AHSFLKNSQL LDNCPRDFNR WYRHISKGGW TFTTADDGWQ VSDCTATALK ACLLLSRISP
501: EIVGEPLEID AQYDAVNCLM SLMNDNGGFS AFELVRSNTW LEHINPTEAF GRVMIEYPYV ECTSSSIQCL ALFKKLHPGH RKEEVENCIS KGANFIESSQ
601: RSDGSWYGSW GICFTYATWF AVTGLVSAGR TLGNSATVRK ACDFLLSKQL PSGGWGESYL SCHDEVYTNL KGNRPHGTHT AWAMIALIDA GQAERDPVPL
701: HRAAKALLNL QLEDGEFPQQ EIVGVFLQTA MISYSQYRNI FPIMALTGYR RRVLLAGNI
101: ISRVCNLQAH DGHWPGDYAG LMFFLPGLII TLHVSGVLNT VLSSEHQKEM RRYIYNHQNE DGGWGLHIEG HSTMLGSSLN YVALRLLGEG PNGGDGCIEN
201: GRNWILDHGG ATFTTSWGKF WLSVLGVFDW SGNNPVPPEL LLLPYQLPFH PGRMSSYIRM VFIPMSYIYG KRFVGPVTPV VLELRSELYN DPYDEIDWNK
301: ARTQCAKEDM YYPRSSKLDM FWSFLHKFIE PVLLRWPGRK LREKALATSM RNVHYEDECT RYICFGGVPK ALNILACWIE DPSSEAFKCH IARVYDYLWI
401: AEDGMKMQIY DGSQVWDAGL TVEALVATDL VKELGPTLKR AHSFLKNSQL LDNCPRDFNR WYRHISKGGW TFTTADDGWQ VSDCTATALK ACLLLSRISP
501: EIVGEPLEID AQYDAVNCLM SLMNDNGGFS AFELVRSNTW LEHINPTEAF GRVMIEYPYV ECTSSSIQCL ALFKKLHPGH RKEEVENCIS KGANFIESSQ
601: RSDGSWYGSW GICFTYATWF AVTGLVSAGR TLGNSATVRK ACDFLLSKQL PSGGWGESYL SCHDEVYTNL KGNRPHGTHT AWAMIALIDA GQAERDPVPL
701: HRAAKALLNL QLEDGEFPQQ EIVGVFLQTA MISYSQYRNI FPIMALTGYR RRVLLAGNI
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.