CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63677	Canola	cytosol	19.81	22.11
CDY08878	Canola	cytosol	32.08	18.38
CDX85104	Canola	cytosol	94.34	13.09
CDX77512	Canola	cytosol	95.28	13.0
CDY20917	Canola	cytosol	49.06	12.68
CDY50938	Canola	cytosol	83.02	11.53
CDX93093	Canola	cytosol	83.02	11.46
OQU83221	Sorghum	cytosol	60.38	8.36
Os11t0189600-01	Rice	cytosol, mitochondrion	59.43	8.3
TraesCS5B01G545900.1	Wheat	cytosol	56.6	8.21
HORVU5Hr1G122220.1	Barley	mitochondrion	57.55	8.04
CDY72111	Canola	cytosol	31.13	8.01
Zm00001d035389_P001	Maize	cytosol, nucleus, peroxisome	42.45	7.72
CDX79277	Canola	cytosol	50.0	7.71
CDY25386	Canola	cytosol, plasma membrane, plastid	41.51	7.51
CDX87419	Canola	cytosol	53.77	7.45
CDY52589	Canola	cytosol	50.94	7.43
CDY49432	Canola	cytosol	50.94	7.43
CDX87420	Canola	cytosol	52.83	7.29
CDY34478	Canola	cytosol, extracellular	25.47	7.24
CDX88494	Canola	endoplasmic reticulum, plasma membrane	52.83	7.22
CDX88493	Canola	cytosol	52.83	7.2
CDY57947	Canola	cytosol	51.89	7.17
CDY35103	Canola	mitochondrion	50.0	6.73
CDY29797	Canola	cytosol	43.4	6.04
CDY25392	Canola	cytosol	43.4	6.04
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	27.36	5.74
CDY38925	Canola	cytosol, nucleus, plasma membrane	36.79	5.3
CDY29789	Canola	cytosol	2.83	3.06
CDY20916	Canola	cytosol	3.77	1.58
Zm00001d035392_P001	Maize	cytosol	1.89	0.85
CDX89541	Canola	cytosol	0.94	0.68
CDY40048	Canola	cytosol	0.0	0.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDX85103	EnsemblPlantsGene:GSBRNA2T00142583001	Gene3D:1.50.10.20	InterPro:SQ_cyclase_C	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF36	PFAM:PF13243	ProteinID:CDX85103	ProteinID:CDX85103.1	SUPFAM:SSF48239	UniParc:UPI0004EE54E4
MapMan:35.1	:	:	:	:	:

Description

BnaC07g08030D

Coordinates

chrLK031840:-:473743..475646

Molecular Weight (calculated)

11955.5 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.084

Length

106 amino acids

Sequence
(BLAST)

001: MILLDRPNSV TGVYTGIKGN KSHVVNTSWA LLALIGAGQA EVDQEPLHRA ARYLMNAQLE EGDFPQQEIM GVFNRNCMIT YAAYRNIFPI WALGEYRSKV
101: ILQQVE

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.