Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66677 | Soybean | cytosol | 36.05 | 38.97 |
| CDY29789 | Canola | cytosol | 22.45 | 33.67 |
| CDY38925 | Canola | cytosol, nucleus, plasma membrane | 69.39 | 13.86 |
| CDX87419 | Canola | cytosol | 55.1 | 10.59 |
| CDY25392 | Canola | cytosol | 54.42 | 10.51 |
| CDY57947 | Canola | cytosol | 53.74 | 10.3 |
| CDX87420 | Canola | cytosol | 53.74 | 10.29 |
| CDY29797 | Canola | cytosol | 53.06 | 10.25 |
| CDX88494 | Canola | endoplasmic reticulum, plasma membrane | 53.74 | 10.18 |
| CDY35103 | Canola | mitochondrion | 54.42 | 10.15 |
| CDX88493 | Canola | cytosol | 53.06 | 10.03 |
| CDY49432 | Canola | cytosol | 48.98 | 9.9 |
| CDY52589 | Canola | cytosol | 48.98 | 9.9 |
| VIT_09s0054g01210.t01 | Wine grape | cytosol | 48.98 | 9.51 |
| KRH66671 | Soybean | cytosol | 48.98 | 9.45 |
| KRH46975 | Soybean | endoplasmic reticulum | 46.94 | 9.06 |
| KRH44692 | Soybean | endoplasmic reticulum | 45.58 | 8.79 |
| CDY50938 | Canola | cytosol | 40.82 | 7.86 |
| CDX93093 | Canola | cytosol | 40.82 | 7.81 |
| CDX77512 | Canola | cytosol | 38.78 | 7.34 |
| CDX85104 | Canola | cytosol | 37.41 | 7.2 |
| CDY20916 | Canola | cytosol | 12.24 | 7.11 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 34.69 | 6.74 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 34.01 | 6.59 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 34.01 | 6.59 |
| Zm00001d024337_P001 | Maize | cytosol | 31.97 | 6.5 |
| CDY08878 | Canola | cytosol | 8.16 | 6.49 |
| EES13537 | Sorghum | cytosol | 32.65 | 6.3 |
| Os08t0223900-00 | Rice | cytosol | 31.97 | 5.99 |
| CDY40048 | Canola | cytosol | 2.72 | 4.94 |
| CDX79277 | Canola | cytosol | 19.05 | 4.08 |
| KRH11342 | Soybean | cytosol | 17.69 | 3.74 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 17.69 | 3.53 |
| CDY72111 | Canola | cytosol | 8.16 | 2.91 |
| CDY20917 | Canola | cytosol | 7.48 | 2.68 |
| KRH10719 | Soybean | cytosol | 8.16 | 2.63 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 9.52 | 2.39 |
| KRH66676 | Soybean | cytosol | 10.2 | 2.38 |
| CDY63677 | Canola | cytosol | 1.36 | 2.11 |
| CDY34478 | Canola | cytosol, extracellular | 4.76 | 1.88 |
| CDX89540 | Canola | endoplasmic reticulum, golgi, plastid | 6.12 | 1.78 |
| CDX85103 | Canola | cytosol | 0.68 | 0.94 |
Protein Annotations
| EnsemblPlants:CDX89541 | EnsemblPlantsGene:GSBRNA2T00149849001 | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | ProteinID:CDX89541 |
| ProteinID:CDX89541.1 | SEG:seg | SUPFAM:SSF48239 | UniParc:UPI0004EEC550 | MapMan:35.1 | : |
Description
BnaC04g35600D
Coordinates
chrLK031859:-:974439..975867
Molecular Weight (calculated)
17208.9 Da
IEP (calculated)
10.023
GRAVY (calculated)
-0.321
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLRIGAEA GQDPYLFSTN NYLGRQIWEF DADAGSAEEL AEVEEARRNF AANRSHYKAS ADLLWRMQFL REKKFEQNIP RVKALRRGIL YIAPPIIKTN
101: QQFKIYQFIC LYISLAIWIK SSLKNIGKRC YVTCTTIRTR MVAGEYT
101: QQFKIYQFIC LYISLAIWIK SSLKNIGKRC YVTCTTIRTR MVAGEYT
001: MWRLRIGAKA GNDTHLFTTN NYVGRQIWEF DANAGSPQEL AEVEEARRNF SNNRSHYKAS ADLLWRMQFL REKGFEQKIP RVRVEDAAKI RYEDAKTALK
101: RGLHYFTALQ ADDGHWPADN SGPNFFIAPL VICLYITGHL EKIFTVEHRI ELIRYMYNHQ NEDGGWGLHV ESPSIMFCTV INYICLRIVG VEAGHDDDQG
201: STCTKARKWI LDHGGATYTP LIGKACLSVL GVYDWSGCKP MPPEFWFLPS SFPINGGTLW IYLRDIFMGL SYLYGKKFVA TPTPLILQLQ EELYPEPYTK
301: INWRLTRNRC AKEDLCYPSS FLQDLFWKGV HIFSESILNR WPFNKLIRQA ALRTTMKLLH YQDEANRYIT GGSVPKAFHM LACWVEDPEG EYFKKHLARV
401: SDFIWIGEDG LKIQSFGSQL WDTVMSLHFL LDGVEDDVDD EIRSTLVKGY DYLKKSQVTE NPPSDHIKMF RHISKGGWTF SDKDQGWPVS DCTAESLKCC
501: LLFERMPSEF VGQKMDVEKL FDAVDFLLYL QSDNGGITAW EPADGKTWLE WFSPVEFVQD TVIEHEYDIF ITSLSSIYYW FG
101: RGLHYFTALQ ADDGHWPADN SGPNFFIAPL VICLYITGHL EKIFTVEHRI ELIRYMYNHQ NEDGGWGLHV ESPSIMFCTV INYICLRIVG VEAGHDDDQG
201: STCTKARKWI LDHGGATYTP LIGKACLSVL GVYDWSGCKP MPPEFWFLPS SFPINGGTLW IYLRDIFMGL SYLYGKKFVA TPTPLILQLQ EELYPEPYTK
301: INWRLTRNRC AKEDLCYPSS FLQDLFWKGV HIFSESILNR WPFNKLIRQA ALRTTMKLLH YQDEANRYIT GGSVPKAFHM LACWVEDPEG EYFKKHLARV
401: SDFIWIGEDG LKIQSFGSQL WDTVMSLHFL LDGVEDDVDD EIRSTLVKGY DYLKKSQVTE NPPSDHIKMF RHISKGGWTF SDKDQGWPVS DCTAESLKCC
501: LLFERMPSEF VGQKMDVEKL FDAVDFLLYL QSDNGGITAW EPADGKTWLE WFSPVEFVQD TVIEHEYDIF ITSLSSIYYW FG
Arabidopsis Description
PEN1Arabidiol synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9FR95]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.