CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10719	Soybean	cytosol	48.42	73.9
KRH66676	Soybean	cytosol	66.81	73.81
CDY40048	Canola	cytosol	8.33	71.6
KRH44692	Soybean	endoplasmic reticulum	76.15	69.55
KRH46975	Soybean	endoplasmic reticulum	75.43	68.9
KRH66671	Soybean	cytosol	75.14	68.64
Solyc12g006520.1.1	Tomato	cytosol	66.67	66.48
PGSC0003DMT400048796	Potato	cytosol	68.53	62.68
Solyc12g006530.1.1	Tomato	cytosol	68.1	62.29
PGSC0003DMT400051584	Potato	cytosol	66.95	61.24
PGSC0003DMT400043981	Potato	cytosol	53.59	61.15
PGSC0003DMT400048795	Potato	cytosol	63.94	60.71
Solyc12g006510.1.1	Tomato	cytosol	64.94	59.95
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	8.62	55.05
Bra035809.1-P	Field mustard	cytosol	44.83	53.33
CDY25386	Canola	cytosol, plasma membrane, plastid	44.83	53.24
KRG92127	Soybean	cytosol	57.76	52.48
KRH13217	Soybean	cytosol	46.55	51.92
KRH41389	Soybean	cytosol	56.18	51.25
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	37.07	51.09
KRH74134	Soybean	endoplasmic reticulum	55.03	50.59
CDY49432	Canola	cytosol	52.73	50.48
CDY52589	Canola	cytosol	52.59	50.34
AT1G78500.2	Thale cress	cytosol	55.03	49.93
Bra039929.1-P	Field mustard	cytosol	51.87	49.66
AT5G48010.2	Thale cress	cytosol	54.17	49.22
CDY38925	Canola	cytosol, nucleus, plasma membrane	52.01	49.18
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	53.59	49.08
AT4G15340.1	Thale cress	mitochondrion	53.74	48.83
CDY29797	Canola	cytosol	53.16	48.62
AT5G36150.1	Thale cress	cytosol	53.02	48.55
HORVU7Hr1G000400.1	Barley	cytosol, plastid	50.72	47.9
CDY25392	Canola	cytosol	52.16	47.7
AT4G15370.1	Thale cress	cytosol	52.01	47.69
AT5G42600.1	Thale cress	cytosol	52.01	47.57
KRH74136	Soybean	cytosol	52.01	47.2
TraesCS4A01G495100.1	Wheat	cytosol	50.29	46.24
TraesCS7D01G004000.1	Wheat	cytosol	50.29	46.11
TraesCS7A01G003500.1	Wheat	cytosol	49.71	45.59
AT3G29255.1	Thale cress	cytosol	46.12	45.47
EES13537	Sorghum	cytosol	49.43	45.14
Os08t0223900-00	Rice	cytosol	50.43	44.71
Solyc12g035440.1.1	Tomato	cytosol	5.46	43.68
Zm00001d024337_P001	Maize	cytosol	45.11	43.43
CDY08878	Canola	cytosol	10.2	38.38
CDY63677	Canola	cytosol	4.31	31.58
KRH66677	Soybean	cytosol	5.89	30.15
Bra035810.1-P	Field mustard	cytosol, mitochondrion	4.02	20.0
CDX89541	Canola	cytosol	3.74	17.69
KRH38081	Soybean	cytosol	0.43	4.05

Protein Annotations

EMBL:ACUP02009202	EnsemblPlants:KRH11342	EnsemblPlantsGene:GLYMA_15G101800	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0016853	GO:GO:0016866	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpenoid_cyclase/PrenylTrfase
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	PFAM:PF13243	PFAM:PF13249	ProteinID:KRH11342	ProteinID:KRH11342.1
SUPFAM:SSF48239	TIGRFAMs:TIGR01787	UniParc:UPI0002965D5F	UniProt:I1MFB9	MapMan:9.1.4.3	:

Description

hypothetical protein

Coordinates

chr15:-:7929726..7940888

Molecular Weight (calculated)

80061.8 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.289

Length

696 amino acids

Sequence
(BLAST)

001: FLREKNFRQT ITSVKIQDDE EITNEKTTNT LKRAIHYLSA LQTSNGYWPA QFSGPLFPTA LFVMCMYITG HLDSIFPEEY RKEILRYIYF HQNEDGGWGL
101: NIDGHSTMFS TTLNYICMRI LGEGPNGGHN NACAKARKWI HDHGSVTHIP SWGKFWLSVL GVVDWCGSNP LPPEFWILPT FSPMHPAKMW CYCRLIYMPM
201: SYLYGKKFVG SITPLVLNLR EELFTQPYDE NSWKKARHKC AKEDLYYPHP WIQDLIWDSL YLFVEPLLTR WPLNKLIREK ALQVTMKHIH YENENSRYLD
301: MACVEKSLCM LACWVEDPNG DAFKKHLARI PDYFWVSEDG MIVQPVIGSQ AWDISFIVQA LLATDLIEEF GPTLAKAHDF IKKSQLTDNL PGDFKSMYRH
401: ISKGAWTFSH KDDGWQLSDS TAECLKCCLL LSMMPQEIVG EKMEPEKLYD SVDFILSLQS KNGGIPAWEP VRSQKWLERL NPTEFYADLI IENDYVECTG
501: SAIQSLVFFK SLYPEYRKKE IENFINKAVQ FLEDEQSTDG SWSGKWGVYS TYSSWFALRG LAAAGKTYTN CVTIRKAVKF LLSIQTEDGG WGESYLSGAK
601: NTYVPLEGNR SNVVQTAWAL MALIHAGQAE KDPTPIHNAA KLLINSQLED GDWPQQEVTG LFLKTGALHY PLYRNYFPMW ALSEYRKKVM LPCTAA

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.