CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	14.04	58.72
KRH66676	Soybean	cytosol	72.37	52.38
KRH11342	Soybean	cytosol	73.9	48.42
KRH46975	Soybean	endoplasmic reticulum	78.73	47.11
KRH44692	Soybean	endoplasmic reticulum	78.51	46.98
KRH66671	Soybean	cytosol	77.41	46.33
Solyc12g006520.1.1	Tomato	cytosol	69.52	45.42
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	47.37	42.77
Solyc12g006530.1.1	Tomato	cytosol	71.05	42.58
PGSC0003DMT400048796	Potato	cytosol	70.83	42.44
Bra035809.1-P	Field mustard	cytosol	52.85	41.2
PGSC0003DMT400051584	Potato	cytosol	67.54	40.47
CDY25386	Canola	cytosol, plasma membrane, plastid	51.97	40.44
Solyc12g006510.1.1	Tomato	cytosol	66.23	40.05
PGSC0003DMT400048795	Potato	cytosol	64.25	39.97
KRH13217	Soybean	cytosol	51.54	37.66
CDY08878	Canola	cytosol	15.13	37.3
KRG92127	Soybean	cytosol	60.96	36.29
PGSC0003DMT400043981	Potato	cytosol	47.59	35.57
CDY49432	Canola	cytosol	56.36	35.35
CDY52589	Canola	cytosol	56.14	35.21
KRH74134	Soybean	endoplasmic reticulum	58.33	35.14
KRH41389	Soybean	cytosol	57.89	34.6
AT3G29255.1	Thale cress	cytosol	52.19	33.71
CDY63677	Canola	cytosol	7.02	33.68
Bra039929.1-P	Field mustard	cytosol	53.07	33.29
HORVU7Hr1G000400.1	Barley	cytosol, plastid	53.73	33.24
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	54.61	32.76
AT1G78500.2	Thale cress	cytosol	55.04	32.72
KRH74136	Soybean	cytosol	54.61	32.46
AT4G15340.1	Thale cress	mitochondrion	54.39	32.38
TraesCS4A01G495100.1	Wheat	cytosol	53.73	32.36
CDY38925	Canola	cytosol, nucleus, plasma membrane	51.75	32.07
TraesCS7A01G003500.1	Wheat	cytosol	52.85	31.75
CDY25392	Canola	cytosol	52.85	31.67
CDY29797	Canola	cytosol	52.85	31.67
TraesCS7D01G004000.1	Wheat	cytosol	52.63	31.62
AT5G48010.2	Thale cress	cytosol	53.07	31.59
AT5G36150.1	Thale cress	cytosol	52.63	31.58
AT5G42600.1	Thale cress	cytosol	52.41	31.41
AT4G15370.1	Thale cress	cytosol	51.97	31.23
EES13537	Sorghum	cytosol	51.32	30.71
Os08t0223900-00	Rice	cytosol	51.75	30.06
Zm00001d024337_P001	Maize	cytosol	44.74	28.22
CDX89541	Canola	cytosol	2.63	8.16
CDY40048	Canola	cytosol	0.88	4.94
KRH38081	Soybean	cytosol	0.66	4.05
Solyc12g035440.1.1	Tomato	cytosol	0.66	3.45
KRH66677	Soybean	cytosol	0.44	1.47
Bra035810.1-P	Field mustard	cytosol, mitochondrion	0.44	1.43

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	UniProt:A0A0R0G851	EMBL:ACUP02009153	EnsemblPlantsGene:GLYMA_15G065600	GO:GO:0003674
GO:GO:0003824	GO:GO:0016866	EnsemblPlants:KRH10719	ProteinID:KRH10719	ProteinID:KRH10719.1	PFAM:PF13243
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0006EDCAC1	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:4981427..4985949

Molecular Weight (calculated)

52307.7 Da

IEP (calculated)

5.565

GRAVY (calculated)

-0.143

Length

456 amino acids

Sequence
(BLAST)

001: MCNEDLYYPH HWIQDLLWDS LYVFTEPLLN CWPFNKLVRE KALQVTMKHI HYEDENSRYI AIGCVEKVLC MLACWVEDPN GDAFKKHLAR IPDYLWVSED
101: GMTMQGIGTQ SWDAGFIVQA LLATNLIDDF GPTIAKAHDF IKKSQVRENP SGDFKSMYRH ICKGSWTLAD RDHAWQVSDT TAECLKCCLL LSVLPQDIVG
201: EKMELEKLHD SINLILSLQS KNGGMTAWEP AGAYKWLELL NPTEFFADIV VEHEYLECTA SAIQVLVLFK KLYPEHRKEE IENFIAKAVT FIEDTQLENG
301: SWYGNWAVCF TYSSWFALGG LVAAGKTYTN CVTIRKAVKF LLKIQNKDGG WGESYLSCPR KMYVPLEGSR SNVVQTSWAL MALIHAEQAE RDPTPLHHAA
401: KLLINSQLED GDWPQQETLG VYLRNCLVHY SFYRNIFPMW ALAEYRTNVL LPSFTI

Best Arabidopsis Sequence Match ( AT1G78955.1 )
(BLAST)

001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.