CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38081	Soybean	cytosol	34.56	63.51
Bra035810.1-P	Field mustard	cytosol, mitochondrion	51.47	50.0
CDX89541	Canola	cytosol	38.97	36.05
Solyc12g035440.1.1	Tomato	cytosol	16.91	26.44
KRH66671	Soybean	cytosol	87.5	15.62
KRH44692	Soybean	endoplasmic reticulum	80.88	14.44
KRH46975	Soybean	endoplasmic reticulum	80.88	14.44
PGSC0003DMT400043981	Potato	cytosol	53.68	11.97
PGSC0003DMT400048796	Potato	cytosol	61.76	11.04
PGSC0003DMT400048795	Potato	cytosol	58.82	10.91
PGSC0003DMT400051584	Potato	cytosol	61.03	10.91
Solyc12g006510.1.1	Tomato	cytosol	59.56	10.74
Solyc12g006530.1.1	Tomato	cytosol	59.56	10.64
Bra039929.1-P	Field mustard	cytosol	56.62	10.59
CDY38925	Canola	cytosol, nucleus, plasma membrane	53.68	9.92
AT4G15370.1	Thale cress	cytosol	54.41	9.75
AT5G36150.1	Thale cress	cytosol	54.41	9.74
CDY29797	Canola	cytosol	54.41	9.72
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	53.68	9.61
CDY25392	Canola	cytosol	53.68	9.59
AT4G15340.1	Thale cress	mitochondrion	53.68	9.53
AT1G78500.2	Thale cress	cytosol	52.94	9.39
AT5G42600.1	Thale cress	cytosol	51.47	9.2
CDY49432	Canola	cytosol	47.79	8.94
CDY52589	Canola	cytosol	47.79	8.94
KRH41389	Soybean	cytosol	50.0	8.91
KRG92127	Soybean	cytosol	48.53	8.62
AT5G48010.2	Thale cress	cytosol	47.79	8.49
KRH74134	Soybean	endoplasmic reticulum	47.06	8.45
KRH74136	Soybean	cytosol	44.12	7.82
TraesCS4A01G495100.1	Wheat	cytosol	41.18	7.4
TraesCS7D01G004000.1	Wheat	cytosol	41.18	7.38
Os08t0223900-00	Rice	cytosol	41.91	7.26
AT3G29255.1	Thale cress	cytosol	37.5	7.22
TraesCS7A01G003500.1	Wheat	cytosol	39.71	7.11
EES13537	Sorghum	cytosol	38.97	6.96
Zm00001d024337_P001	Maize	cytosol	36.76	6.92
CDY08878	Canola	cytosol	8.09	5.95
KRH11342	Soybean	cytosol	30.15	5.89
Solyc12g006520.1.1	Tomato	cytosol	29.41	5.73
HORVU7Hr1G000400.1	Barley	cytosol, plastid	19.12	3.53
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	1.47	1.83
KRH13217	Soybean	cytosol	3.68	0.8
KRH66676	Soybean	cytosol	2.21	0.48
KRH10719	Soybean	cytosol	1.47	0.44
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	1.47	0.4
Bra035809.1-P	Field mustard	cytosol	1.47	0.34
CDY25386	Canola	cytosol, plasma membrane, plastid	1.47	0.34
CDY63677	Canola	cytosol	0.0	0.0
CDY40048	Canola	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02002005	EnsemblPlants:KRH66677	EnsemblPlantsGene:GLYMA_03G121600	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16
ProteinID:KRH66677	ProteinID:KRH66677.1	SUPFAM:SSF48239	UniParc:UPI000296848B	UniProt:K7KEL0	MapMan:35.1

Description

hypothetical protein

Coordinates

chr3:-:33418210..33420445

Molecular Weight (calculated)

15717.5 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.509

Length

136 amino acids

Sequence
(BLAST)

001: MWRLKIADGG KDPYIFSTNN FVGRQTWEFD PEAGTPEERA QVEAARQNFY NNRFKFKACG DLLWRFQILR ENNFKETISS VKIEDGEEIT YEKVTATMTR
101: AAHYLCALQT SDGHWPAQIA GAMFFVPPLV STKYSY

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.