Factsheet for PGSC0003DMT400048796

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g006530.1.1	Tomato	cytosol	97.63	97.63
PGSC0003DMT400043981	Potato	cytosol	72.67	90.66
PGSC0003DMT400051584	Potato	cytosol	90.01	90.01
PGSC0003DMT400048795	Potato	cytosol	86.47	89.77
VIT_09s0054g01220.t01	Wine grape	cytosol	82.52	82.96
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	53.48	79.49
VIT_09s0054g01390.t01	Wine grape	cytosol	79.89	79.27
VIT_09s0054g01410.t01	Wine grape	cytosol	79.89	79.06
KRH46975	Soybean	endoplasmic reticulum	78.84	78.74
KRH44692	Soybean	endoplasmic reticulum	78.84	78.74
CDY40048	Canola	cytosol	8.28	77.78
VIT_09s0054g01470.t01	Wine grape	cytosol	39.82	76.9
VIT_09s0054g01230.t01	Wine grape	cytosol	77.66	76.85
KRH66671	Soybean	cytosol	76.35	76.25
KRH66676	Soybean	cytosol	61.1	73.81
VIT_09s0054g01340.t01	Wine grape	cytosol	38.9	71.5
KRH10719	Soybean	cytosol	42.44	70.83
VIT_09s0054g01520.t01	Wine grape	cytosol	79.76	69.85
PGSC0003DMT400048787	Potato	cytosol	5.26	68.97
KRH11342	Soybean	cytosol	62.68	68.53
VIT_09s0054g01370.t01	Wine grape	cytosol	11.96	67.91
VIT_09s0054g01480.t01	Wine grape	cytosol	36.53	66.19
VIT_09s0054g01280.t01	Wine grape	cytosol	30.35	65.07
KRH66677	Soybean	cytosol	11.04	61.76
PGSC0003DMT400035250	Potato	cytosol	54.66	60.12
PGSC0003DMT400073861	Potato	mitochondrion	37.71	58.22
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	31.41	55.58
TraesCS4A01G495100.1	Wheat	cytosol	53.22	53.5
TraesCS7D01G004000.1	Wheat	cytosol	52.04	52.17
TraesCS7A01G003500.1	Wheat	cytosol	51.91	52.04
EES13537	Sorghum	cytosol	50.99	50.92
Os08t0223900-00	Rice	cytosol	51.91	50.32
PGSC0003DMT400062376	Potato	extracellular, vacuole	12.75	50.26
HORVU7Hr1G000400.1	Barley	cytosol, plastid	48.09	49.66
Zm00001d024337_P001	Maize	cytosol	46.39	48.82

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:102592553	MapMan:9.1.4.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	UniProt:M1BMW3	PFAM:PF13243	PFAM:PF13249	EnsemblPlantsGene:PGSC0003DMG402018962	PGSC:PGSC0003DMG402018962
EnsemblPlants:PGSC0003DMT400048796	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000295C5A5
RefSeq:XP_006364890.1	RefSeq:XP_015159672.1	SEG:seg	:	:	:

Description

Beta-amyrin synthase [Source:PGSC_GENE;Acc:PGSC0003DMG402018962]

Coordinates

chr12:-:5418296..5425849

Molecular Weight (calculated)

87392.5 Da

IEP (calculated)

5.948

GRAVY (calculated)

-0.308

Length

761 amino acids

Sequence
(BLAST)

001: MWKLKIAEGQ KGPYLYSTNN YVGRQTWEFD PNAGTIEERA EIEEARQQFW NNRYKVKPSS DLLWRMQFLG EKNFKQIIPA VKVEEDEEIS HEVATIALHR
101: AVNFFSALQA SDGHWPAENA GPLFFLPPLV MCMYITGHLN TVFPAEHRKE ILRYLYCHQN EDGGWGLHIE GHSTMFCTAL SYICMRILGE GPDGGVNNAC
201: ARARKWILDH GSVTAIPSWG KTWLSILGVF EWIGTNPMPP EFWILPSFLP VHPAKMWCYC RMVYMPMSYL YGKRFVGPIT PLILQLREEL YDQPYNEINW
301: KKVRHVCAKE DLYYPHPLVQ DLMWDSLYIC TEPLLTRWPF NKLRNKALEV TMKHIHYEDE NSRYITIGCV EKVLCMLACW VEDPNGDYFK KHLARIPDYL
401: WVAEDGMKMQ SFGSQEWDTG FAIQALLASE MNDEIADTLR KGHDFIKQSQ VTDNPSGDFK GMYRHISKGS WTFSDQDHGW QVSDCTAEAL KCCLLFSTMP
501: RELVGQAMEP GRLYDSVNVI LSLQSKNGGL AAWEPAGASE YLELLNPTEF FADIVIEHEY VECTASSIQA LVLFKKLYPG HRTKEINIFI DNAVKYLEDV
601: QMPDGSWYGN WGVCFTYGSW FALGGLAAAG KSYNNCAAVR KGVEFLLRTQ RSDGGWGESY RSCPDKVYRE LETNDSNLVQ TAWALMGLIH SGQVDRDPRP
701: LHRAAKLLIN SQMEDGDFPQ QEITGVFMKN CMLHYAAYRN IYPLWGLAEY RKNVLLPLEN N

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol,plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.