Factsheet for VIT_09s0054g01360.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01470.t01	Wine grape	cytosol	70.31	91.37
VIT_09s0054g01160.t01	Wine grape	extracellular	15.82	80.2
VIT_09s0054g01340.t01	Wine grape	cytosol	64.06	79.23
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	10.35	77.94
VIT_09s0054g01280.t01	Wine grape	cytosol	46.09	66.48
VIT_09s0054g01140.t01	Wine grape	extracellular	24.8	64.14
VIT_04s0008g02990.t01	Wine grape	cytosol	11.72	63.83
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	13.28	62.39
VIT_09s0054g01410.t01	Wine grape	cytosol	92.58	61.64
VIT_09s0054g01390.t01	Wine grape	cytosol	91.21	60.89
VIT_09s0054g01170.t01	Wine grape	cytosol	5.27	60.0
VIT_09s0054g01220.t01	Wine grape	cytosol	88.67	59.97
VIT_09s0054g01200.t01	Wine grape	cytosol	11.72	59.41
VIT_09s0054g01230.t01	Wine grape	cytosol	88.48	58.91
VIT_10s0116g01060.t01	Wine grape	cytosol	10.16	58.43
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	28.71	56.11
VIT_10s0003g03570.t01	Wine grape	cytosol	15.62	55.56
VIT_09s0054g01520.t01	Wine grape	cytosol	91.41	53.85
PGSC0003DMT400048796	Potato	cytosol	79.49	53.48
PGSC0003DMT400051584	Potato	cytosol	75.39	50.72
VIT_09s0054g01210.t01	Wine grape	cytosol	74.02	50.07
PGSC0003DMT400048795	Potato	cytosol	71.29	49.8
VIT_04s0008g02980.t01	Wine grape	mitochondrion	14.84	48.72
PGSC0003DMT400043981	Potato	cytosol	56.25	47.21
VIT_09s0054g01250.t01	Wine grape	cytosol	25.59	44.11
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	24.8	43.05
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	5.66	42.65
VIT_11s0065g00030.t01	Wine grape	cytosol	61.91	41.82
VIT_10s0003g03650.t01	Wine grape	cytosol	59.57	40.18
VIT_10s0003g03530.t01	Wine grape	cytosol	56.45	39.81
VIT_10s0003g03520.t01	Wine grape	cytosol	57.23	38.91
VIT_09s0054g01120.t01	Wine grape	cytosol	53.12	38.2
VIT_09s0018g00630.t01	Wine grape	cytosol	56.05	37.86
VIT_09s0054g01550.t01	Wine grape	cytosol	55.86	37.73
VIT_11s0065g00640.t01	Wine grape	cytosol	55.47	37.37
VIT_10s0003g03660.t01	Wine grape	cytosol	57.23	37.04
VIT_09s0054g01180.t01	Wine grape	cytosol	46.29	36.86
VIT_09s0054g01110.t01	Wine grape	cytosol	56.25	36.18
HORVU7Hr1G000400.1	Barley	cytosol, plastid	50.39	35.01
VIT_10s0003g03550.t01	Wine grape	extracellular	6.64	34.0
TraesCS4A01G495100.1	Wheat	cytosol	50.0	33.82
TraesCS7D01G004000.1	Wheat	cytosol	49.8	33.6
TraesCS7A01G003500.1	Wheat	cytosol	49.61	33.47
EES13537	Sorghum	cytosol	49.41	33.2
Os08t0223900-00	Rice	cytosol	50.39	32.87
Zm00001d024337_P001	Maize	cytosol	44.14	31.26
VIT_09s0054g01090.t01	Wine grape	cytosol	56.05	30.24
VIT_09s0054g01480.t01	Wine grape	cytosol	16.8	20.48
VIT_04s0008g03000.t01	Wine grape	cytosol	11.52	19.22
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	1.95	15.62
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	4.69	8.73
VIT_10s0003g03540.t01	Wine grape	cytosol	3.71	8.52
VIT_10s0003g03610.t01	Wine grape	cytosol	3.71	6.74
VIT_09s0054g01290.t01	Wine grape	cytosol	1.17	4.65
Solyc12g035440.1.1	Tomato	cytosol	0.59	3.45
VIT_09s0054g01370.t01	Wine grape	cytosol	0.78	2.99
VIT_09s0054g01500.t01	Wine grape	cytosol	0.39	2.0
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	0.0	0.0
VIT_09s0054g01130.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	0.0	0.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	ProteinID:CBI18395	ProteinID:CBI18395.3	UniProt:D7SRW3	EMBL:FN594972
GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	PFAM:PF13243	ScanProsite:PS01074
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001BE11EC	ArrayExpress:VIT_09s0054g01360	EnsemblPlantsGene:VIT_09s0054g01360	EnsemblPlants:VIT_09s0054g01360.t01

Description

No Description!

Coordinates

chr9:-:22300742..22304109

Molecular Weight (calculated)

58692.6 Da

IEP (calculated)

6.454

GRAVY (calculated)

-0.294

Length

512 amino acids

Sequence
(BLAST)

001: MPPEFWLFPS RLPMHPAKMW CHCRLVYMPI KELFLQPYNE INWKKVRHLC AKEDLYYSHP LIQDLMWDSL YICTEPLLTR WPFNKLRQKA LEVTMKHIHY
101: EDENSRYITI GCVAKVLCML SCWVEDPNGD YFKKHLARIP DYIWVAEDGI KMQSFGSQEW DTSFALQALL ACNMTDELGP ALKKGHEFIK ESQVKDNPSG
201: DFKSMYRHIS KGSWTFSDQD HGWQVSDCTA EGLKCCLLFS MMTPEIVGMK MEPERLFDSV NILLSLQSKN GGLAAWEPAG ASEWLELLNP TEFFPDIVIE
301: HEYVECTASA IKALVSFKKL HPGHRKKEID NFITNAAKYI EDMQMPDGSW YGNWGVCFTY GSWFALGGLA AAGKTYHNCL AIGRAVEFLL KSQRDDGGWG
401: ENCTSCSDKK YMPLEGNKSN LVQTGWALMG LLSSGQAERD PTPLHRAAKL FINSQMEDGD FPQQEITGAF MKNCLLHYAD YRNIFPLWAL AEYVSECHRL
501: KSGCIAMPKK YL

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.