Factsheet for VIT_10s0003g03660.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	13.65	95.58
VIT_10s0003g03650.t01	Wine grape	cytosol	89.25	93.02
VIT_10s0003g03530.t01	Wine grape	cytosol	85.33	92.98
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	32.11	92.36
VIT_10s0003g03570.t01	Wine grape	cytosol	16.43	90.28
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	33.0	88.47
VIT_10s0003g03520.t01	Wine grape	cytosol	83.57	87.78
VIT_10s0003g03610.t01	Wine grape	cytosol	30.34	85.11
VIT_10s0003g03540.t01	Wine grape	cytosol	23.01	81.61
VIT_10s0003g03550.t01	Wine grape	extracellular	8.34	66.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.56	65.67
VIT_09s0054g01160.t01	Wine grape	extracellular	8.34	65.35
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.44	63.24
VIT_09s0054g01220.t01	Wine grape	cytosol	59.92	62.62
VIT_09s0054g01500.t01	Wine grape	cytosol	7.71	61.0
VIT_09s0054g01390.t01	Wine grape	cytosol	57.9	59.71
VIT_11s0065g00030.t01	Wine grape	cytosol	57.02	59.5
VIT_09s0054g01410.t01	Wine grape	cytosol	57.52	59.17
VIT_09s0054g01230.t01	Wine grape	cytosol	56.89	58.52
VIT_09s0054g01210.t01	Wine grape	cytosol	55.5	57.99
VIT_09s0054g01470.t01	Wine grape	cytosol	28.82	57.87
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	37.04	57.23
VIT_04s0008g03000.t01	Wine grape	cytosol	22.12	57.0
VIT_09s0054g01370.t01	Wine grape	cytosol	9.36	55.22
VIT_04s0008g02980.t01	Wine grape	mitochondrion	10.87	55.13
VIT_09s0054g01130.t01	Wine grape	cytosol	13.02	55.08
VIT_09s0054g01180.t01	Wine grape	cytosol	44.5	54.74
VIT_11s0065g00640.t01	Wine grape	cytosol	52.47	54.61
VIT_09s0018g00630.t01	Wine grape	cytosol	51.71	53.96
VIT_09s0054g01550.t01	Wine grape	cytosol	51.33	53.56
VIT_09s0054g01120.t01	Wine grape	cytosol	47.91	53.23
VIT_09s0054g01340.t01	Wine grape	cytosol	27.69	52.9
VIT_09s0054g01520.t01	Wine grape	cytosol	57.14	52.01
VIT_10s0116g01060.t01	Wine grape	cytosol	5.82	51.69
VIT_09s0054g01110.t01	Wine grape	cytosol	51.96	51.63
VIT_09s0054g01200.t01	Wine grape	cytosol	6.57	51.49
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.42	51.47
VIT_09s0054g01480.t01	Wine grape	cytosol	27.31	51.43
TraesCS4A01G495100.1	Wheat	cytosol	47.79	49.93
TraesCS7D01G004000.1	Wheat	cytosol	47.66	49.67
TraesCS7A01G003500.1	Wheat	cytosol	47.28	49.28
VIT_09s0054g01250.t01	Wine grape	cytosol	18.33	48.82
EES13537	Sorghum	cytosol	46.9	48.69
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.92	48.44
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	15.93	48.09
VIT_09s0054g01290.t01	Wine grape	cytosol	7.84	48.06
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	9.99	47.88
Os08t0223900-00	Rice	cytosol	47.28	47.64
CDY20917	Canola	cytosol	24.65	47.56
HORVU7Hr1G000400.1	Barley	cytosol, plastid	44.25	47.49
Zm00001d024337_P001	Maize	cytosol	43.36	47.44
VIT_09s0054g01140.t01	Wine grape	extracellular	11.38	45.45
VIT_09s0054g01280.t01	Wine grape	cytosol	19.47	43.38
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	5.94	43.12
VIT_09s0054g01090.t01	Wine grape	cytosol	50.44	42.04
VIT_09s0054g01170.t01	Wine grape	cytosol	2.28	40.0
VIT_04s0008g02990.t01	Wine grape	cytosol	4.55	38.3
CDY34478	Canola	cytosol, extracellular	17.07	36.19

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	ProteinID:CCB55801	ProteinID:CCB55801.1	UniProt:F6HLS7	EMBL:FN595992
GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	PFAM:PF13243	PFAM:PF13249
ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239
InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000210934C	ArrayExpress:VIT_10s0003g03660
EnsemblPlantsGene:VIT_10s0003g03660	EnsemblPlants:VIT_10s0003g03660.t01	:	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6HLS7]

Coordinates

chr10:+:6180708..6185676

Molecular Weight (calculated)

90447.1 Da

IEP (calculated)

7.123

GRAVY (calculated)

-0.220

Length

791 amino acids

Sequence
(BLAST)

001: MWKLKVAEGH GPWLYSLNNY VGRQIWEFDP EAGTPEEREE VRKVQENFTK NRFRYKPNGD LLMRMQLIKE NQIDLSIPPV RLGEKEEVTY EAVTTAVRKA
101: VRLNRAIQAK DGHWPAENAG PLFFTPPLIM VLYFTGTLNI ALTPEHKVEL LRYITNHQNE DGGWGFHIEG HSTMLGTTLS YISMRILGVG PDDKAVAAGR
201: KWILDRGGAT YSPSWGKCYL SVFGLYEWSG CNPLPPEFWL FPSFLPMHPD KMWCYCRTVY MPMSYLYGTR FQAPITDLVL QLREEMHTKP YHEINWVKAR
301: LLCAKEDYYY PHSLIQDVLW GGLYHFGELI LKHWPVSKIR ERAVKKAIDI IHWEDENSRY LTPGCVEKAF HMMAVWAENP DSNSDAFKHH LARIPDYLWM
401: AEDGMKVQSF GSQLWDTSLC IQAILESGMV EEYGTTLKKG HDYVKLSQVS YLFTPKTSTT TMLRIFIKVT AIIIPNLNCS VKKIHLVITG VGIVTFQKEP
501: GLSLIAIMVG KSLDCTSEAL RVLLLLSQFP EELVGEKAEP QRLFDAVNFL FSLQGKSGGL AVWEPAGAEE WLEKLNPSEL FANIVTEHEY VECTSSAIQT
601: LLLFKKLYPN HRRKEVDNFI EKATCYVENV QRPDGSWYGG WGVCFTYAAW FALSGLAAVG KTYSNSKTVH KGVDFLLSKQ KANGGWGESY LSCPYIVYVH
701: LEEDRTNLVQ TAWCLMGLIE AGQVERDPTP LHKAAKLLIN SQLDNGDFPQ EEITGVYMNN CMLHYASYRN IFPTWALGMY RRRVLKPPQK L

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.