Factsheet for VIT_09s0054g01410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01500.t01	Wine grape	cytosol	12.09	93.0
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	61.64	92.58
VIT_09s0054g01220.t01	Wine grape	cytosol	90.12	91.55
VIT_09s0054g01390.t01	Wine grape	cytosol	91.03	91.26
VIT_09s0054g01470.t01	Wine grape	cytosol	46.03	89.85
VIT_09s0054g01230.t01	Wine grape	cytosol	89.73	89.73
VIT_09s0054g01370.t01	Wine grape	cytosol	15.34	88.06
VIT_09s0054g01340.t01	Wine grape	cytosol	45.25	84.06
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	7.15	80.88
VIT_09s0054g01520.t01	Wine grape	cytosol	90.9	80.44
PGSC0003DMT400048796	Potato	cytosol	79.06	79.89
VIT_09s0054g01160.t01	Wine grape	extracellular	10.4	79.21
PGSC0003DMT400043981	Potato	cytosol	62.81	79.18
VIT_09s0054g01210.t01	Wine grape	cytosol	77.76	79.0
PGSC0003DMT400051584	Potato	cytosol	76.59	77.4
VIT_09s0054g01480.t01	Wine grape	cytosol	41.74	76.43
PGSC0003DMT400048795	Potato	cytosol	72.43	75.99
VIT_09s0054g01140.t01	Wine grape	extracellular	19.38	75.25
VIT_09s0054g01290.t01	Wine grape	cytosol	12.61	75.19
VIT_09s0054g01130.t01	Wine grape	cytosol	17.69	72.73
VIT_09s0054g01280.t01	Wine grape	cytosol	32.64	70.7
VIT_04s0008g03000.t01	Wine grape	cytosol	26.27	65.8
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	9.23	65.14
VIT_04s0008g02990.t01	Wine grape	cytosol	7.8	63.83
Solyc12g035440.1.1	Tomato	cytosol	7.15	63.22
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	24.06	62.71
VIT_10s0003g03530.t01	Wine grape	cytosol	58.52	61.98
VIT_11s0065g00030.t01	Wine grape	cytosol	60.86	61.74
VIT_10s0003g03650.t01	Wine grape	cytosol	60.6	61.4
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.33	61.19
VIT_09s0054g01200.t01	Wine grape	cytosol	7.93	60.4
VIT_09s0054g01180.t01	Wine grape	cytosol	50.33	60.19
VIT_10s0003g03520.t01	Wine grape	cytosol	58.26	59.5
VIT_09s0018g00630.t01	Wine grape	cytosol	58.52	59.37
VIT_09s0054g01120.t01	Wine grape	cytosol	54.88	59.27
VIT_09s0054g01550.t01	Wine grape	cytosol	57.87	58.71
VIT_10s0116g01060.t01	Wine grape	cytosol	6.76	58.43
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	20.68	57.82
VIT_09s0054g01170.t01	Wine grape	cytosol	3.38	57.78
VIT_10s0003g03660.t01	Wine grape	cytosol	59.17	57.52
VIT_10s0003g03570.t01	Wine grape	cytosol	10.66	56.94
VIT_09s0054g01110.t01	Wine grape	cytosol	58.26	56.28
VIT_11s0065g00640.t01	Wine grape	cytosol	55.53	56.18
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	18.86	55.34
VIT_04s0008g02980.t01	Wine grape	mitochondrion	11.18	55.13
VIT_10s0003g03610.t01	Wine grape	cytosol	20.16	54.96
VIT_09s0054g01250.t01	Wine grape	cytosol	20.42	52.86
TraesCS4A01G495100.1	Wheat	cytosol	50.98	51.78
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.29	51.56
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.54	51.33
VIT_10s0003g03550.t01	Wine grape	extracellular	6.63	51.0
TraesCS7D01G004000.1	Wheat	cytosol	50.2	50.86
TraesCS7A01G003500.1	Wheat	cytosol	50.2	50.86
EES13537	Sorghum	cytosol	50.33	50.79
VIT_10s0003g03540.t01	Wine grape	cytosol	14.69	50.67
Os08t0223900-00	Rice	cytosol	51.5	50.45
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.42	50.0
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	10.66	49.7
HORVU7Hr1G000400.1	Barley	cytosol, plastid	47.46	49.53
Zm00001d024337_P001	Maize	cytosol	46.03	48.96
VIT_09s0054g01090.t01	Wine grape	cytosol	55.92	45.31

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100249623	wikigene:100249623	EntrezGene:100261496	wikigene:100261496	MapMan:9.1.4.3
ProteinID:CBI18392	ProteinID:CBI18392.3	UniProt:D7SRW0	EMBL:FN594972	GO:GO:0003674	GO:GO:0003824
GO:GO:0016853	GO:GO:0016866	EntrezGene:LOC100249623	wikigene:LOC100249623	EntrezGene:LOC100261496	wikigene:LOC100261496
PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI00015CA779	ArrayExpress:VIT_09s0054g01410	EnsemblPlantsGene:VIT_09s0054g01410	EnsemblPlants:VIT_09s0054g01410.t01	unigene:Vvi.16267	RefSeq:XP_002272124
RefSeq:XP_002272124.2	RefSeq:XP_010655243.1	SEG:seg	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:D7SRW0]

Coordinates

chr9:-:22339783..22345616

Molecular Weight (calculated)

88098.9 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.293

Length

769 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIYSTNN FVGRQIWEFD PDYGTPEERN EVEAARENFW KNRYQVKPSS DLLWRMQFLR EKNFKQTIPQ VKVGDGEAIT YETATIALRR
101: SAHFFSALQA SDGHWPAENS GPLYFLPPLV MCLYITGHLD IVFPGEFLKE ILRYLYCHQN EDGGWGFHIE GQSTMFCTTL SYICMRILGE GRDGGRDNAC
201: ARGRKWIHDR GGVTSIPSWG KTWLSLFGLF DWSGSNPMPP EFWLLPSFLP MHPARMFCYS RMVYMPMSYL YGKRFIGPIT PLVLELREEL FLQPYNEINW
301: KKVRHLCAKE DLYYPHPLIQ DLMWDSLYIC TEPLLTRWPF KKLRKKALEV TMKHIHYEDE NSRYITIGCV EKVLCMLACW VEDPNGDYFK KHLARIPDYI
401: WVAEDGIKMQ SFGSQEWDTS FALQALLACN MTDELGLALK KGHEFIKESQ VKDNPSGDFK SMYRHISKGS WTFSDQDHGW QVSDCTAEGL KCCLLFSMMA
501: PKIVGMKMEP ERLFDSVNIL LSLQSKNGGL AAWEPAGASK WLELLNPTEF FTDIVIEHEY VECTASAIQA LVLFKKLYPG HRKNEIDNFI TNAAKYIEDM
601: QMPDGSWYGN WGVCFTYGSW FALGGLAAAG KTYHNCLAIG RAVEFLLKSQ RDDGGWGENC TSCPDKKYTP LKGNRSNLVQ TGWALMGLLS SGQAERDPTP
701: LHKAAKLLIN SQMEDGDFPQ QEITGAFMKN CMLHYATYRN TFPLWALAQY VSGCHCLKAG CIAMPLKHL

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.