Factsheet for VIT_09s0054g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01390.t01	Wine grape	cytosol	83.77	94.92
VIT_09s0054g01470.t01	Wine grape	cytosol	42.12	92.89
VIT_09s0054g01220.t01	Wine grape	cytosol	80.67	92.6
VIT_09s0054g01230.t01	Wine grape	cytosol	81.93	92.59
VIT_09s0054g01370.t01	Wine grape	cytosol	14.15	91.79
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	53.85	91.41
VIT_09s0054g01410.t01	Wine grape	cytosol	80.44	90.9
VIT_09s0054g01340.t01	Wine grape	cytosol	42.12	88.41
VIT_09s0054g01500.t01	Wine grape	cytosol	10.13	88.0
VIT_09s0054g01480.t01	Wine grape	cytosol	39.93	82.62
PGSC0003DMT400048796	Potato	cytosol	69.85	79.76
VIT_09s0054g01210.t01	Wine grape	cytosol	69.04	79.26
VIT_09s0054g01160.t01	Wine grape	extracellular	9.09	78.22
PGSC0003DMT400043981	Potato	cytosol	54.89	78.2
PGSC0003DMT400051584	Potato	cytosol	67.2	76.74
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.98	76.47
PGSC0003DMT400048795	Potato	cytosol	64.44	76.4
VIT_09s0054g01130.t01	Wine grape	cytosol	16.11	74.87
VIT_09s0054g01140.t01	Wine grape	extracellular	17.03	74.75
VIT_09s0054g01290.t01	Wine grape	cytosol	10.36	69.77
VIT_04s0008g03000.t01	Wine grape	cytosol	24.4	69.06
VIT_09s0054g01280.t01	Wine grape	cytosol	27.73	67.89
VIT_09s0054g01170.t01	Wine grape	cytosol	3.34	64.44
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	8.06	64.22
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	4.95	64.18
VIT_04s0008g02990.t01	Wine grape	cytosol	6.9	63.83
Solyc12g035440.1.1	Tomato	cytosol	6.33	63.22
VIT_11s0065g00030.t01	Wine grape	cytosol	54.43	62.4
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	20.94	61.69
VIT_09s0054g01180.t01	Wine grape	cytosol	45.45	61.43
VIT_10s0003g03530.t01	Wine grape	cytosol	51.09	61.16
VIT_10s0003g03650.t01	Wine grape	cytosol	53.16	60.87
VIT_09s0018g00630.t01	Wine grape	cytosol	52.47	60.16
VIT_09s0054g01120.t01	Wine grape	cytosol	49.25	60.11
VIT_09s0054g01550.t01	Wine grape	cytosol	51.9	59.5
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	18.76	59.27
VIT_10s0003g03520.t01	Wine grape	cytosol	50.98	58.83
VIT_09s0054g01200.t01	Wine grape	cytosol	6.67	57.43
VIT_09s0054g01110.t01	Wine grape	cytosol	52.47	57.29
VIT_10s0003g03660.t01	Wine grape	cytosol	52.01	57.14
VIT_11s0065g00640.t01	Wine grape	cytosol	49.6	56.71
VIT_04s0008g02980.t01	Wine grape	mitochondrion	10.13	56.41
VIT_10s0003g03570.t01	Wine grape	cytosol	9.32	56.25
VIT_10s0116g01060.t01	Wine grape	cytosol	5.75	56.18
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	16.92	56.11
VIT_10s0003g03610.t01	Wine grape	cytosol	17.95	55.32
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.02	53.98
VIT_09s0054g01250.t01	Wine grape	cytosol	17.84	52.19
TraesCS4A01G495100.1	Wheat	cytosol	45.34	52.05
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.8	51.56
TraesCS7D01G004000.1	Wheat	cytosol	44.99	51.52
TraesCS7A01G003500.1	Wheat	cytosol	44.99	51.52
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	9.78	51.52
VIT_10s0003g03540.t01	Wine grape	cytosol	13.12	51.12
EES13537	Sorghum	cytosol	44.65	50.92
Os08t0223900-00	Rice	cytosol	45.11	49.94
HORVU7Hr1G000400.1	Barley	cytosol, plastid	42.23	49.8
Zm00001d024337_P001	Maize	cytosol	41.08	49.38
VIT_10s0003g03550.t01	Wine grape	extracellular	5.64	49.0
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	3.8	48.53
VIT_09s0054g01090.t01	Wine grape	cytosol	50.06	45.84

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100251248	wikigene:100251248	MapMan:9.1.4.3	ProteinID:CCB45023	ProteinID:CCB45023.1
UniProt:F6GYI7	EMBL:FN594972	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866
EntrezGene:LOC100251248	wikigene:LOC100251248	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PFscan:PS51257
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase
TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002109513	ArrayExpress:VIT_09s0054g01520	EnsemblPlantsGene:VIT_09s0054g01520
EnsemblPlants:VIT_09s0054g01520.t01	SEG:seg	:	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYI7]

Coordinates

chr9:-:22441827..22464239

Molecular Weight (calculated)

99669.1 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.377

Length

869 amino acids

Sequence
(BLAST)

001: MACVEKTAGS QQWDTSLAIQ ALTACNLTDE IGATLMKGHD FIKKSQVRDN PSGDFRSMYR YIFKGSWTFL DRDHGWQVSN CTTKSLKKMW RLKVADGGND
101: PYIYSTNNFV GRQIWEFDPD YGTPEERAEV EAARENFWKN RFQVKPSSDL LWRMQFLREK NFKQTIPQVK VGDGEEITYE TATAAVRRGA HFFSALQASD
201: GHWPAENAGA LYFLPPLVMC LYITGHLETV FPREYRKEIL RYLYCHQNED GGWGLHIEGH STMFCTTLSY ICMRILGEGR DGGRDNACAR GRKWILDRGG
301: VTSIPSWGKT WLSIFGLFDW SGSNPMPPEF WLFPSRLPII QVTHEYLKIQ PGDAKMWCYC RLVYMPMSYL YGKRFVGPIT PLVLELRKEL FLQPYNEINW
401: KKVRHLCAKE DLYYPHPLIQ DLMWDSLYIC TEPLLTRWPF NKLRQKALEV TMKHIHYEDE NSRYITIGCV EKVLCMLSCW VEDPDGDYFK KHLARIPDYI
501: WVGEDGIKMQ SFGSQEWDTG FALQALLACN MTDEIGPTLK KGHEFVKESQ VKDNPSGDFK SMYRHISKGS WTFSDQDHGW QVSDCTAEGL KCCLLFSMMA
601: PEIVGTKMEP ERLFDSVNIL LSLQSKNGGI VGWEPAGASE WLELLNPTEM FEDLVIEHEY VECTASAIQA LVLFKKLYPR HRTEEIDNFI TNATKYIEDQ
701: QMPDGSWYGN WGVCFTYGSW FALGGLAAAG RTYHNCLAIG SAVEFLLKSQ RDDGGWGESY ISCQEKKHTP LKGNKSNLVQ TGWALMGLLS SGQAERDPTP
801: LHRAAKLLIN SQMEDGDFPQ QEITGAFLKN CMSHYADYRN IFPLWALAEY VSQCHRLKSG CIAMPKKHL

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.