Factsheet for TraesCS7A01G003500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G495100.1	Wheat	cytosol	95.65	95.9
TraesCS7D01G004000.1	Wheat	cytosol	95.65	95.65
HORVU7Hr1G000400.1	Barley	cytosol, plastid	88.14	90.77
EES13537	Sorghum	cytosol	85.11	84.78
Os08t0223900-00	Rice	cytosol	85.38	82.55
Zm00001d024337_P001	Maize	cytosol	75.49	79.25
CDY40048	Canola	cytosol	5.93	55.56
VIT_11s0065g00030.t01	Wine grape	cytosol	54.55	54.62
CDY72111	Canola	cytosol	29.38	54.13
TraesCS5A01G004900.1	Wheat	mitochondrion	54.02	54.02
KRH66676	Soybean	cytosol	44.8	53.97
TraesCS6A01G110800.1	Wheat	cytosol, golgi	54.02	53.95
KRG92127	Soybean	cytosol	54.41	53.92
VIT_09s0054g01160.t01	Wine grape	extracellular	7.11	53.47
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	44.66	53.22
CDX87420	Canola	cytosol	53.49	52.86
KRH10719	Soybean	cytosol	31.75	52.85
TraesCS6A01G110200.1	Wheat	mitochondrion	52.31	52.65
TraesCS4A01G499100.1	Wheat	cytosol	27.67	52.63
KRH44692	Soybean	endoplasmic reticulum	52.83	52.62
KRH46975	Soybean	endoplasmic reticulum	52.83	52.62
VIT_09s0054g01470.t01	Wine grape	cytosol	27.27	52.54
AT1G78955.1	Thale cress	cytosol	53.23	52.54
PGSC0003DMT400035250	Potato	cytosol	47.83	52.46
KRH41389	Soybean	cytosol	52.7	52.42
AT1G78970.1	Thale cress	cytosol	52.17	52.31
CDX88493	Canola	cytosol	53.49	52.19
Bra026038.1-P	Field mustard	cytosol	52.04	52.18
TraesCS7A01G001700.1	Wheat	mitochondrion	47.43	52.17
AT1G78950.2	Thale cress	cytosol, plasma membrane, plastid	52.7	52.08
TraesCS7A01G232900.1	Wheat	mitochondrion	51.38	51.93
PGSC0003DMT400048796	Potato	cytosol	52.04	51.91
Solyc12g006530.1.1	Tomato	cytosol	52.04	51.91
VIT_09s0054g01220.t01	Wine grape	cytosol	51.65	51.78
KRH66671	Soybean	cytosol	51.91	51.71
CDX87419	Canola	cytosol	52.04	51.63
Bra035079.1-P	Field mustard	cytosol	51.91	51.5
VIT_09s0054g01200.t01	Wine grape	cytosol	6.85	51.49
PGSC0003DMT400043981	Potato	cytosol	41.37	51.48
Solyc07g042630.2.1	Tomato	cytosol	51.25	51.45
CDX79277	Canola	cytosol	46.51	51.38
TraesCS4A01G498200.2	Wheat	cytosol	50.59	51.13
TraesCS4A01G498900.1	Wheat	cytosol	6.19	51.09
VIT_10s0003g03650.t01	Wine grape	cytosol	50.99	50.99
AT1G78960.2	Thale cress	cytosol	51.25	50.98
Bra003630.1-P	Field mustard	cytosol	51.52	50.98
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	19.76	50.85
TraesCS4A01G496400.1	Wheat	mitochondrion	50.59	50.79
CDY57947	Canola	cytosol	51.25	50.72
VIT_09s0054g01390.t01	Wine grape	cytosol	51.12	50.59
Solyc12g006520.1.1	Tomato	cytosol	46.51	50.57
VIT_10s0003g03530.t01	Wine grape	cytosol	48.35	50.55
Solyc12g006510.1.1	Tomato	cytosol	50.2	50.53
CDY35103	Canola	mitochondrion	52.17	50.25
VIT_09s0054g01230.t01	Wine grape	cytosol	50.86	50.2
VIT_09s0054g01410.t01	Wine grape	cytosol	50.86	50.2
VIT_09s0054g01210.t01	Wine grape	cytosol	49.93	50.07
PGSC0003DMT400051584	Potato	cytosol	50.2	50.07
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	50.99	50.06
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.22	50.0
VIT_09s0054g01500.t01	Wine grape	cytosol	6.59	50.0
PGSC0003DMT400048795	Potato	cytosol	48.22	49.93
CDX88494	Canola	endoplasmic reticulum, plasma membrane	50.99	49.87
AT1G66960.2	Thale cress	mitochondrion	50.59	49.74
KRH11342	Soybean	cytosol	45.59	49.71
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	33.47	49.61
VIT_10s0003g03570.t01	Wine grape	cytosol	9.35	49.31
TraesCS4A01G000600.1	Wheat	mitochondrion	49.01	49.21
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	48.75	48.88
VIT_10s0003g03520.t01	Wine grape	cytosol	48.09	48.47
CDY49432	Canola	cytosol	46.38	48.42
CDY52589	Canola	cytosol	46.25	48.28
VIT_09s0054g01340.t01	Wine grape	cytosol	26.22	48.07
VIT_09s0054g01140.t01	Wine grape	extracellular	12.52	47.98
AT1G78500.2	Thale cress	cytosol	48.22	47.72
CDY38925	Canola	cytosol, nucleus, plasma membrane	46.25	47.69
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	47.69	47.63
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	31.49	47.33
VIT_10s0003g03660.t01	Wine grape	cytosol	49.28	47.28
Bra039929.1-P	Field mustard	cytosol	45.19	47.18
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	6.85	46.02
VIT_09s0054g01130.t01	Wine grape	cytosol	11.33	45.99
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	6.59	45.87
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	16.6	45.82
Bra035809.1-P	Field mustard	cytosol	35.31	45.81
AT4G15340.1	Thale cress	mitochondrion	46.11	45.69
CDY25386	Canola	cytosol, plasma membrane, plastid	34.91	45.22
AT5G36150.1	Thale cress	cytosol	45.06	45.0
VIT_09s0054g01520.t01	Wine grape	cytosol	51.52	44.99
AT4G15370.1	Thale cress	cytosol	44.93	44.93
CDY20917	Canola	cytosol	24.11	44.63
AT5G48010.2	Thale cress	cytosol	44.93	44.52
Solyc12g035460.1.1	Tomato	cytosol	13.18	44.44
CDY25392	Canola	cytosol	44.4	44.28
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	3.95	44.12
AT5G42600.1	Thale cress	cytosol	44.14	44.02
AT3G29255.1	Thale cress	cytosol	40.84	43.91
CDY29797	Canola	cytosol	44.01	43.89
VIT_09s0054g01370.t01	Wine grape	cytosol	7.64	43.28
VIT_10s0003g03610.t01	Wine grape	cytosol	16.07	43.26
CDY20916	Canola	cytosol	14.36	43.08
VIT_09s0054g01170.t01	Wine grape	cytosol	2.5	42.22
VIT_09s0054g01280.t01	Wine grape	cytosol	19.63	41.97
Solyc12g035450.1.1	Tomato	cytosol, plasma membrane, plastid	9.49	41.86
VIT_09s0054g01480.t01	Wine grape	cytosol	22.27	40.24
KRH66677	Soybean	cytosol	7.11	39.71
CDY08878	Canola	cytosol	9.62	39.46
Solyc12g035440.1.1	Tomato	cytosol	4.48	39.08
VIT_10s0003g03540.t01	Wine grape	cytosol	11.2	38.12
VIT_09s0054g01290.t01	Wine grape	cytosol	6.32	37.21
Bra035810.1-P	Field mustard	cytosol, mitochondrion	6.72	36.43
CDY34478	Canola	cytosol, extracellular	16.73	34.05
CDX89541	Canola	cytosol	6.59	34.01
CDY63677	Canola	cytosol	3.56	28.42
AT1G78480.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	6.98	26.24

Protein Annotations

EnsemblPlants:TraesCS7A01G003500.1	EnsemblPlantsGene:TraesCS7A01G003500	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF17	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SEG:seg	SUPFAM:SSF48239
TIGR:cd02892	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	:	:	:

Description

No Description!

Coordinates

chr7A:-:1842325..1847150

Molecular Weight (calculated)

85843.3 Da

IEP (calculated)

6.806

GRAVY (calculated)

-0.311

Length

759 amino acids

Sequence
(BLAST)

001: MWKLKIAEGG PWLTSGNNHV GRETWEFDQN DTGSSEERDA VDASRAEFQK NRFRTRHSSD VLARMQLAKG NKFSLDQQQK PKDDETSGDI NIATVSETLR
101: RALRYFSAVQ AHDGHWPGDF PGPLFTTATM IIVLYVTESL STTLSSEHRK EICRYLYNRQ NMDGGWGLHA EGESSMLSSA LNYTALRLLG EGADDGPDMS
201: MPKARKWIHD HGGTTMIPIL GKVWLSVLGV FEWSGVNPMP PELFLLPSFV PIQPGRLWSH FRMAFIPMSY LYGKKFVGPT TKLVLSLREE LHIHPYKKIN
301: WKQARKLCAK EDAYHPHTWL QECLSDCLYS FGESFLACWP VSYMRRKALG QIADFLKYED DISRYICIGA AQKALSMLCC WSENPNSDAF KHHLARVADF
401: LWLGEDGMKV RVCAGQSWDV AFAVQAILAC DVAGEFGSTL KKAHHFLKAS QIVDNPSGDF SRKYRHISKG GWAFQVADQG WQVSDCTAEA LKALLLLSKF
501: PSDIVGDQME TCRFHDAVNV LLSLQNPNGG YGTWELARTY PWMENLNMTE IYADIMVEHQ YVECTSSVIQ ALALFRQKYP SHREDEIEQC IRRATEFIEK
601: LQNEDGSWFG SWGICFTYGT WFAIEGLSAV GQCYNNSTYI RKGCQFLLSK QLRNGGWGES HLSSTTKAYT NLDGEKSHIV NTAWAMLALM KAGQAERDPS
701: PLHEAARLIM SMQLGNGDFP QEEMIGSFLK NGPLCYMAYR NIFPIWALGE YHRLVLCSG

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.