Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G000600.2 | Wheat | mitochondrion | 82.94 | 83.16 |
| EER90340 | Sorghum | cytosol | 67.59 | 69.62 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 69.05 | 69.14 |
| TraesCS7A01G232900.1 | Wheat | mitochondrion | 67.33 | 67.78 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 40.48 | 67.11 |
| TraesCS7A01G001700.1 | Wheat | mitochondrion | 61.11 | 66.96 |
| TraesCS4A01G498200.2 | Wheat | cytosol | 66.14 | 66.58 |
| TraesCS4A01G499100.1 | Wheat | cytosol | 34.66 | 65.66 |
| TraesCS4A01G496400.1 | Wheat | mitochondrion | 65.34 | 65.34 |
| Zm00001d014695_P001 | Maize | cytosol | 66.67 | 65.12 |
| OQU77014 | Sorghum | cytosol | 56.48 | 64.4 |
| TraesCS4A01G498900.1 | Wheat | cytosol | 7.67 | 63.04 |
| TraesCS6A01G111400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 62.17 | 60.8 |
| TraesCS5A01G004900.1 | Wheat | mitochondrion | 55.03 | 54.81 |
| TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 55.03 | 54.74 |
| TraesCS6A01G110200.1 | Wheat | mitochondrion | 53.97 | 54.11 |
| TraesCS5A01G005900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 45.5 | 54.0 |
| TraesCS6A01G110300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 51.19 | 51.12 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 49.21 | 49.14 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 49.21 | 49.01 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.76 | 36.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G000600.1 | EnsemblPlantsGene:TraesCS4A01G000600 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SUPFAM:SSF48239 | TIGR:cd02892 |
| TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:469193..478687
Molecular Weight (calculated)
85448.2 Da
IEP (calculated)
7.231
GRAVY (calculated)
-0.276
Length
756 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKIGEGS RPWLHSASGF LGRQVWEFDR DAGTPEERAE VERLREDFTK HRYHKRESQD LLLRLQFAKG NLLPANIPTT RVVEKGTQVV TEKMITTSLR
101: RALHQYSTLQ AHDGHWPGDV SGLMFIMPML IFSLYVTGSL NIVLSSEHQR EIRRHIYNHQ NEDGGWGTHV WGPSSMFGSC LNYVALRLLG EMLDGDNDVL
201: TKGRAWILSH GSATGVPQWG KIFLSIIGVY DWSGNNPIIP ELWLLPYFLP IHPGRFWCHC RLVYMSMAYL YGKRFVGPIT PTIMALREEL YNIPYDNVDW
301: GKASNYCAKE DLHNPRSQMQ NIVSFCLNKF VEPMLNWWPA NKLRGRALSK LMEQIHYNNE ITEYITSSHV DKILNMICCW VENPNSNAFK KHLPRVYDHL
401: WIAEDGMKAK ICDGCQSWET PFIVQAICST DLIAEFGPTI KKAHEFMKNS QILGNFPSYE SFYRHRSKGS WTLSTIDHGL SISDCTAETL KALLSLSKIS
501: PNLVGDPIEE QRVYDAIEFL LSLMNKDGSF CAYEHRXXXX XXXILNPSES FKNIVIEYPS CECTASVVDA LILFKELYPQ YRGDELGKCI KGAAKFIEGK
601: QLNDGSWYGS WGICFTYGTL FAIKGLIAAG RNYHNSSSIR KACNFLLSKQ QSTGGWGESY LSNYTGEYVD SGTPHTVETA WAMLGLFYGG QTEIDRVPLY
701: RAAQVLMSMQ LDTGEFPQQE HVGSANSAFY FNYPNYRNLY PIMALGEFRR RLVASD
101: RALHQYSTLQ AHDGHWPGDV SGLMFIMPML IFSLYVTGSL NIVLSSEHQR EIRRHIYNHQ NEDGGWGTHV WGPSSMFGSC LNYVALRLLG EMLDGDNDVL
201: TKGRAWILSH GSATGVPQWG KIFLSIIGVY DWSGNNPIIP ELWLLPYFLP IHPGRFWCHC RLVYMSMAYL YGKRFVGPIT PTIMALREEL YNIPYDNVDW
301: GKASNYCAKE DLHNPRSQMQ NIVSFCLNKF VEPMLNWWPA NKLRGRALSK LMEQIHYNNE ITEYITSSHV DKILNMICCW VENPNSNAFK KHLPRVYDHL
401: WIAEDGMKAK ICDGCQSWET PFIVQAICST DLIAEFGPTI KKAHEFMKNS QILGNFPSYE SFYRHRSKGS WTLSTIDHGL SISDCTAETL KALLSLSKIS
501: PNLVGDPIEE QRVYDAIEFL LSLMNKDGSF CAYEHRXXXX XXXILNPSES FKNIVIEYPS CECTASVVDA LILFKELYPQ YRGDELGKCI KGAAKFIEGK
601: QLNDGSWYGS WGICFTYGTL FAIKGLIAAG RNYHNSSSIR KACNFLLSKQ QSTGGWGESY LSNYTGEYVD SGTPHTVETA WAMLGLFYGG QTEIDRVPLY
701: RAAQVLMSMQ LDTGEFPQQE HVGSANSAFY FNYPNYRNLY PIMALGEFRR RLVASD
001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.