Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014695_P001 | Maize | cytosol | 88.39 | 75.71 |
| EER90340 | Sorghum | cytosol | 72.4 | 65.4 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 44.95 | 65.35 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 69.38 | 60.93 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 58.82 | 60.65 |
| KXG35171 | Sorghum | extracellular | 55.05 | 57.84 |
| TraesCS4A01G000600.1 | Wheat | mitochondrion | 64.4 | 56.48 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 63.95 | 56.31 |
| TraesCS4D01G000600.2 | Wheat | mitochondrion | 63.95 | 56.23 |
| OQU80182 | Sorghum | mitochondrion | 61.54 | 56.04 |
| EES14558 | Sorghum | cytosol | 63.05 | 55.15 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 64.71 | 54.1 |
| KXG28324 | Sorghum | cytosol | 22.32 | 53.82 |
| KXG29303 | Sorghum | cytosol | 6.64 | 53.66 |
| KXG28793 | Sorghum | mitochondrion | 61.24 | 53.0 |
| KXG23805 | Sorghum | cytosol | 60.03 | 52.58 |
| EES17376 | Sorghum | mitochondrion | 59.88 | 52.37 |
| EES04501 | Sorghum | cytosol | 56.11 | 50.34 |
| OQU91432 | Sorghum | cytosol | 60.18 | 50.25 |
| EES06259 | Sorghum | cytosol | 55.96 | 49.01 |
| EES06258 | Sorghum | cytosol | 54.45 | 47.44 |
| OQU83221 | Sorghum | cytosol | 52.34 | 45.3 |
| EES13537 | Sorghum | cytosol | 46.61 | 40.55 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 9.95 | 33.17 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.98 | 33.0 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A1W0VUT7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 | GO:GO:0016866 | EnsemblPlants:OQU77014 | ProteinID:OQU77014 |
| ProteinID:OQU77014.1 | PFAM:PF13243 | PFAM:PF13249 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF14 | EnsemblPlantsGene:SORBI_3010G253500 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | TMHMM:TMhelix |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0009DC8DED | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:59241081..59256710
Molecular Weight (calculated)
76265.7 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.294
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYAKLNQRL HPSTPSMKLE NSEEVTEEIL LTSLRRALSQ HSTLQAHDGH WPGEYSGLLI IMPMFIFSLY VTGSINTIIS LEHRREILRY IYNHQNEDGG
101: WSTHVLRTST MLGSCLNYAA LRLLGEVAHG ENDALSKGQA WILSHGSATA LPQWGKIWLS DDSIAFSGWY ICQWHIFMGR NLFWPITPIV LALREELYNI
201: PYDNINWKEA RHSCSKEDLL YPRSQVQNII FTCLNKFVEP MLNCWPINKL RERALHNLME HIHYEDETTK YICLCPVNKV LNMICCWVEN QNSDAFKKHL
301: PRIYDYLWLA EDGMKAQVYN GCQSWETILT VYAFCSTNLI DEFGPTIERA HEYIKRSQVL KDQPNYQSYY RQRSKGSWTL STVDSGWNSP DITAEALKVL
401: ILLSKISPDL VGNPIEEQKL YDAVDCILYS MNKGGTFSSY ECQRTTSWLE ILNPSENFVN IVIDYPYVEC TSSVLEAFIL FKELYPLYRT QEIDECINNA
501: AMFIENKQRK DGSWHGTWGI CFTCGTMFAV KGLVAAGRTY DTSSSIRKAC NFLLSKQQTT GGWGESYLSS ETGKYSNGDT HAVNTAWAML SLIYAGQVER
601: DPIPLYQAAR ELINMQLDTG DFPQQEHIGC FNSNFYLNYA NYRNLYPIWA LGEFHHRLGA NKN
101: WSTHVLRTST MLGSCLNYAA LRLLGEVAHG ENDALSKGQA WILSHGSATA LPQWGKIWLS DDSIAFSGWY ICQWHIFMGR NLFWPITPIV LALREELYNI
201: PYDNINWKEA RHSCSKEDLL YPRSQVQNII FTCLNKFVEP MLNCWPINKL RERALHNLME HIHYEDETTK YICLCPVNKV LNMICCWVEN QNSDAFKKHL
301: PRIYDYLWLA EDGMKAQVYN GCQSWETILT VYAFCSTNLI DEFGPTIERA HEYIKRSQVL KDQPNYQSYY RQRSKGSWTL STVDSGWNSP DITAEALKVL
401: ILLSKISPDL VGNPIEEQKL YDAVDCILYS MNKGGTFSSY ECQRTTSWLE ILNPSENFVN IVIDYPYVEC TSSVLEAFIL FKELYPLYRT QEIDECINNA
501: AMFIENKQRK DGSWHGTWGI CFTCGTMFAV KGLVAAGRTY DTSSSIRKAC NFLLSKQQTT GGWGESYLSS ETGKYSNGDT HAVNTAWAML SLIYAGQVER
601: DPIPLYQAAR ELINMQLDTG DFPQQEHIGC FNSNFYLNYA NYRNLYPIWA LGEFHHRLGA NKN
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.