CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29303	Sorghum	cytosol	21.82	73.17
EES06259	Sorghum	cytosol	74.55	27.08
EES06258	Sorghum	cytosol	74.91	27.07
OQU83221	Sorghum	cytosol	68.36	24.54
OQU77014	Sorghum	cytosol	53.82	22.32
KXG29446	Sorghum	endoplasmic reticulum, extracellular	50.91	21.77
KXG35171	Sorghum	extracellular	49.09	21.39
EER90340	Sorghum	cytosol	55.64	20.84
KXG23805	Sorghum	cytosol	53.82	19.55
OQU80191	Sorghum	cytosol, mitochondrion	53.45	19.52
EES17376	Sorghum	mitochondrion	52.73	19.13
EES14558	Sorghum	cytosol	52.36	19.0
OQU91432	Sorghum	cytosol	54.55	18.89
KXG24790	Sorghum	cytosol, mitochondrion	54.18	18.79
EES13537	Sorghum	cytosol	51.64	18.64
KXG28793	Sorghum	mitochondrion	48.73	17.49
OQU80182	Sorghum	mitochondrion	45.82	17.31
EES04501	Sorghum	cytosol	37.45	13.94
EES08419	Sorghum	cytosol, mitochondrion, plastid	4.36	6.03
Os11t0286400-00	Rice	cytosol	0.36	1.37

Protein Annotations

EnsemblPlants:KXG28324	EnsemblPlantsGene:SORBI_3005G109500	Gene3D:1.50.10.20	InterPro:SQ_cyclase_C	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF36	PFAM:PF13243	ProteinID:KXG28324	ProteinID:KXG28324.1	SUPFAM:SSF48239	TMHMM:TMhelix
UniParc:UPI00081AE6B4	UniProt:A0A1B6PRM0	MapMan:9.1.4.3	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:22751639..22755238

Molecular Weight (calculated)

31396.3 Da

IEP (calculated)

8.356

GRAVY (calculated)

-0.362

Length

275 amino acids

Sequence
(BLAST)

001: MSHVSKIHRI HLKTERAIQI RDSRHNQSMQ YLIVTLGSPS NENGGFATFE LTRSYAWLEH FNPSETFGGI MIDYPYVECT SSSIQALSLF KKLYPEHRRK
101: EVDNAISKGA NFIESMQRND GSWYGSWGIC FTNATWFAVF GLVCAGRTFN NSSAIRKACE FLLSKELPSG GWGESYLSCQ DKVYTNLEGM RPHAVNTGWA
201: MLALIYTEQA ERDPAPLHRA AKVLINLQLE DGEFPQQEII GVFNQNCMIG YSQYRNIFPI WALGEYRTRV HARKK

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.