Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g01330.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 45.12 | 54.41 |
| PGSC0003DMT400048787 | Potato | cytosol | 34.15 | 48.28 |
| VIT_04s0008g02980.t01 | Wine grape | mitochondrion | 57.32 | 30.13 |
| KXG28324 | Sorghum | cytosol | 73.17 | 21.82 |
| PGSC0003DMT400062376 | Potato | extracellular, vacuole | 40.24 | 17.1 |
| PGSC0003DMT400073861 | Potato | mitochondrion | 68.29 | 11.36 |
| GSMUA_Achr7P15790_001 | Banana | cytosol | 74.39 | 10.05 |
| EES06259 | Sorghum | cytosol | 84.15 | 9.11 |
| EES06258 | Sorghum | cytosol | 82.93 | 8.94 |
| VIT_09s0054g01180.t01 | Wine grape | cytosol | 69.51 | 8.86 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 60.98 | 7.78 |
| VIT_11s0065g00640.t01 | Wine grape | cytosol | 70.73 | 7.63 |
| OQU83221 | Sorghum | cytosol | 70.73 | 7.57 |
| KXG35171 | Sorghum | extracellular | 57.32 | 7.45 |
| Solyc04g070980.2.1 | Tomato | plastid | 68.29 | 7.37 |
| KRH74134 | Soybean | endoplasmic reticulum | 67.07 | 7.27 |
| VIT_09s0018g00630.t01 | Wine grape | cytosol | 67.07 | 7.26 |
| VIT_09s0054g01110.t01 | Wine grape | cytosol | 69.51 | 7.16 |
| VIT_09s0054g01550.t01 | Wine grape | cytosol | 65.85 | 7.12 |
| AT2G07050.1 | Thale cress | cytosol | 65.85 | 7.11 |
| OQU77014 | Sorghum | cytosol | 53.66 | 6.64 |
| CDX77512 | Canola | cytosol | 62.2 | 6.56 |
| CDY50938 | Canola | cytosol | 60.98 | 6.55 |
| CDX85104 | Canola | cytosol | 60.98 | 6.54 |
| Bra013167.1-P | Field mustard | cytosol | 60.98 | 6.52 |
| CDX93093 | Canola | cytosol | 60.98 | 6.51 |
| EER90340 | Sorghum | cytosol | 57.32 | 6.4 |
| EES17376 | Sorghum | mitochondrion | 56.1 | 6.07 |
| VIT_09s0054g01090.t01 | Wine grape | cytosol | 69.51 | 6.01 |
| Bra014952.1-P | Field mustard | cytosol | 60.98 | 5.92 |
| KXG23805 | Sorghum | cytosol | 53.66 | 5.81 |
| OQU91432 | Sorghum | cytosol | 56.1 | 5.79 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 54.88 | 5.67 |
| EES13537 | Sorghum | cytosol | 52.44 | 5.64 |
| Zm00001d008674_P001 | Maize | mitochondrion | 35.37 | 5.6 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 51.22 | 5.58 |
| EES14558 | Sorghum | cytosol | 51.22 | 5.54 |
| VIT_09s0054g01120.t01 | Wine grape | cytosol | 40.24 | 4.63 |
| KXG28793 | Sorghum | mitochondrion | 40.24 | 4.31 |
| OQU80182 | Sorghum | mitochondrion | 30.49 | 3.43 |
| EES04501 | Sorghum | cytosol | 13.41 | 1.49 |
| PGSC0003DMT400077891 | Potato | extracellular, golgi, mitochondrion, plastid | 6.1 | 1.16 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 2.44 | 1.01 |
| VIT_09s0054g01250.t01 | Wine grape | cytosol | 2.44 | 0.67 |
| VIT_04s0008g02990.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_04s0008g03000.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| Solyc04g050670.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| CDY29789 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:KXG29303 | EnsemblPlantsGene:SORBI_3004G014400 | Gene3D:1.50.10.20 | InterPro:SQ_cyclase_C | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF36 | PFAM:PF13243 | ProteinID:KXG29303 | ProteinID:KXG29303.1 | SUPFAM:SSF48239 | UniParc:UPI0007F2F56F |
| UniProt:A0A194YM52 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:1170472..1171955
Molecular Weight (calculated)
9242.0 Da
IEP (calculated)
5.625
GRAVY (calculated)
-0.332
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MLALIDAGQA ERDPSPIHRA AKVLINMQSE DGEFPQQEII GVFNKNCMIS YSQYRNIFPI WALGEYRCRV LGAGTQEHQS TS
001: MVETTLKRGL DFYSTIQAHD GHWPGDYGGP MFLLPGLIIT LSITGALNTV LSEQHKQEMR RYLYNHQNED GGWGLHIEGP STMFGSVLNY VTLRLLGEGP
101: NDGDGDMEKG RDWILNHGGA TNITSWGKMW LSVLGAFEWS GNNPLPPEIW LLPYFLPIHP GRMWCHCRMV YLPMSYLYGK RFVGPITSTV LSLRKELFTV
201: PYHEVNWNEA RNLCAKEDLY YPHPLVQDIL WASLHKIVEP VLMRWPGANL REKAIRTAIE HIHYEDENTR YICIGPVNKV LNMLCCWVED PNSEAFKLHL
301: PRIHDFLWLA EDGMKMQGYN GSQLWDTGFA IQAILATNLV EEYGPVLEKA HSFVKNSQVL EDCPGDLNYW YRHISKGAWP FSTADHGWPI SDCTAEGLKA
401: ALLLSKVPKA IVGEPIDAKR LYEAVNVIIS LQNADGGLAT YELTRSYPWL ELINPAETFG DIVIDYPYVE CTSAAIQALI SFRKLYPGHR KKEVDECIEK
501: AVKFIESIQA ADGSWYGSWA VCFTYGTWFG VKGLVAVGKT LKNSPHVAKA CEFLLSKQQP SGGWGESYLS CQDKVYSNLD GNRSHVVNTA WAMLALIGAG
601: QAEVDRKPLH RAARYLINAQ MENGDFPQQE IMGVFNRNCM ITYAAYRNIF PIWALGEYRC QVLLQQGE
101: NDGDGDMEKG RDWILNHGGA TNITSWGKMW LSVLGAFEWS GNNPLPPEIW LLPYFLPIHP GRMWCHCRMV YLPMSYLYGK RFVGPITSTV LSLRKELFTV
201: PYHEVNWNEA RNLCAKEDLY YPHPLVQDIL WASLHKIVEP VLMRWPGANL REKAIRTAIE HIHYEDENTR YICIGPVNKV LNMLCCWVED PNSEAFKLHL
301: PRIHDFLWLA EDGMKMQGYN GSQLWDTGFA IQAILATNLV EEYGPVLEKA HSFVKNSQVL EDCPGDLNYW YRHISKGAWP FSTADHGWPI SDCTAEGLKA
401: ALLLSKVPKA IVGEPIDAKR LYEAVNVIIS LQNADGGLAT YELTRSYPWL ELINPAETFG DIVIDYPYVE CTSAAIQALI SFRKLYPGHR KKEVDECIEK
501: AVKFIESIQA ADGSWYGSWA VCFTYGTWFG VKGLVAVGKT LKNSPHVAKA CEFLLSKQQP SGGWGESYLS CQDKVYSNLD GNRSHVVNTA WAMLALIGAG
601: QAEVDRKPLH RAARYLINAQ MENGDFPQQE IMGVFNRNCM ITYAAYRNIF PIWALGEYRC QVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.