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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013798_P001 Maize mitochondrion 80.1 84.46
Os11t0286800-01 Rice cytosol 73.3 76.98
TraesCS6D01G006500.1 Wheat cytosol 62.22 74.06
EER90340 Sorghum cytosol 62.09 67.17
OQU80191 Sorghum cytosol, mitochondrion 61.96 65.34
KXG29446 Sorghum endoplasmic reticulum, extracellular 51.64 63.76
OQU80182 Sorghum mitochondrion 57.68 62.91
KXG24790 Sorghum cytosol, mitochondrion 62.22 62.3
EES14558 Sorghum cytosol 58.94 61.74
KXG35171 Sorghum extracellular 48.99 61.65
EES17376 Sorghum mitochondrion 57.56 60.29
OQU77014 Sorghum cytosol 50.25 60.18
KXG28793 Sorghum mitochondrion 57.81 59.92
KXG23805 Sorghum cytosol 57.05 59.84
EES04501 Sorghum cytosol 53.65 57.65
KXG29303 Sorghum cytosol 5.79 56.1
KXG28324 Sorghum cytosol 18.89 54.55
EES06259 Sorghum cytosol 50.76 53.24
EES06258 Sorghum cytosol 50.38 52.56
OQU83221 Sorghum cytosol 49.75 51.57
EES08419 Sorghum cytosol, mitochondrion, plastid 12.72 50.75
EES13537 Sorghum cytosol 44.84 46.72
VIT_10s0003g03550.t01 Wine grape extracellular 4.41 35.0
Protein Annotations
Gene3D:1.50.10.20MapMan:9.1.4.3UniProt:A0A1Z5S675GO:GO:0003674GO:GO:0003824GO:GO:0016853
GO:GO:0016866EnsemblPlants:OQU91432ProteinID:OQU91432ProteinID:OQU91432.1PFAM:PF13243PFAM:PF13249
ScanProsite:PS01074PANTHER:PTHR11764PANTHER:PTHR11764:SF23EnsemblPlantsGene:SORBI_3001G179740InterPro:SQ_cyclase_CInterPro:SQ_cyclase_N
SUPFAM:SSF48239InterPro:Squalene_cyclaseTIGRFAMs:TIGR01787InterPro:Terpene_synthase_CSInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI000B8BA16F
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:15205320..15231888
Molecular Weight (calculated)
91023.0 Da
IEP (calculated)
7.106
GRAVY (calculated)
-0.259
Length
794 amino acids
Sequence
(BLAST)
001: MWRLKIGERP SNPLLRSPNG FFGREVWEFD PAAGTPEERA EVERLRREYT RNRFTHRECS DLLMRMQEIK FIATQTMTTN IIESTHLSKA NLNTDFMKIL
101: CALNRYTKQN LHSTNLPSIK IDNDSEATGE TILAVLRRAL SQFSSLQGPD GHWPGGYSGI LFILPLMIFA LHVTRSLHEV LSIEHIHEIC RYIYNIQNED
201: GGWGTHTLGP SSMFGTCVNY ATLRILGEVL DGENDALSKG RAWILSHGTA TAAPQWAKIY LSVVGAYDWS GNNAIIPELW MLPHFLPIHP GRFWCFCRMV
301: YMPMAYIYGK KFVGPITPTI LAIRNEIYNI PYNEIDWNKA RNSCAKEDLI YRRSWLQSVA LAYLNNFVEP LSNLWPMNKL RERAMSNLME HIHYEDENSN
401: YVGLCPINKV LNMICCWIEK PNSHEFRQHL PRIHDFLWIA EDGMKSKVYV GCQSWETALI VQAFCSTGLT EEFCSTLQKA HQFLQNAQIT EDIPNYKSYY
501: RERTKGSWTL SNGENVWAIA DTNAEALKAI LLLSDIPSEL VGNTIKQERL YDAIDCLLSF VNKDGTLSSA ECKRTTSWVE FINPSESFRN IIVDYPYPEC
601: TSSLIQVLIL FRDKCPMYRR EEIDKIIKSG ASFIEKVQRK DGSWYGSWAV CFTYATFFGI KGLADAGRTY QNSLPIRKAC NFLLSKQLAT GGWGESYLSC
701: QTEEYVDSGR PHAVQTAQAM LALLYAGQVE QDPAPLYRAA KELINMQMEN GEFPQQEIVG NFNSSLFFNY PNFRNLFPIW ALGEFRRRLL AKKS
Best Arabidopsis Sequence Match ( AT1G78960.1 )
(BLAST)
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.