Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d013798_P001 | Maize | mitochondrion | 80.1 | 84.46 |
Os11t0286800-01 | Rice | cytosol | 73.3 | 76.98 |
TraesCS6D01G006500.1 | Wheat | cytosol | 62.22 | 74.06 |
EER90340 | Sorghum | cytosol | 62.09 | 67.17 |
OQU80191 | Sorghum | cytosol, mitochondrion | 61.96 | 65.34 |
KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 51.64 | 63.76 |
OQU80182 | Sorghum | mitochondrion | 57.68 | 62.91 |
KXG24790 | Sorghum | cytosol, mitochondrion | 62.22 | 62.3 |
EES14558 | Sorghum | cytosol | 58.94 | 61.74 |
KXG35171 | Sorghum | extracellular | 48.99 | 61.65 |
EES17376 | Sorghum | mitochondrion | 57.56 | 60.29 |
OQU77014 | Sorghum | cytosol | 50.25 | 60.18 |
KXG28793 | Sorghum | mitochondrion | 57.81 | 59.92 |
KXG23805 | Sorghum | cytosol | 57.05 | 59.84 |
EES04501 | Sorghum | cytosol | 53.65 | 57.65 |
KXG29303 | Sorghum | cytosol | 5.79 | 56.1 |
KXG28324 | Sorghum | cytosol | 18.89 | 54.55 |
EES06259 | Sorghum | cytosol | 50.76 | 53.24 |
EES06258 | Sorghum | cytosol | 50.38 | 52.56 |
OQU83221 | Sorghum | cytosol | 49.75 | 51.57 |
EES08419 | Sorghum | cytosol, mitochondrion, plastid | 12.72 | 50.75 |
EES13537 | Sorghum | cytosol | 44.84 | 46.72 |
VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.41 | 35.0 |
Protein Annotations
Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A1Z5S675 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
GO:GO:0016866 | EnsemblPlants:OQU91432 | ProteinID:OQU91432 | ProteinID:OQU91432.1 | PFAM:PF13243 | PFAM:PF13249 |
ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | EnsemblPlantsGene:SORBI_3001G179740 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000B8BA16F |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:15205320..15231888
Molecular Weight (calculated)
91023.0 Da
IEP (calculated)
7.106
GRAVY (calculated)
-0.259
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKIGERP SNPLLRSPNG FFGREVWEFD PAAGTPEERA EVERLRREYT RNRFTHRECS DLLMRMQEIK FIATQTMTTN IIESTHLSKA NLNTDFMKIL
101: CALNRYTKQN LHSTNLPSIK IDNDSEATGE TILAVLRRAL SQFSSLQGPD GHWPGGYSGI LFILPLMIFA LHVTRSLHEV LSIEHIHEIC RYIYNIQNED
201: GGWGTHTLGP SSMFGTCVNY ATLRILGEVL DGENDALSKG RAWILSHGTA TAAPQWAKIY LSVVGAYDWS GNNAIIPELW MLPHFLPIHP GRFWCFCRMV
301: YMPMAYIYGK KFVGPITPTI LAIRNEIYNI PYNEIDWNKA RNSCAKEDLI YRRSWLQSVA LAYLNNFVEP LSNLWPMNKL RERAMSNLME HIHYEDENSN
401: YVGLCPINKV LNMICCWIEK PNSHEFRQHL PRIHDFLWIA EDGMKSKVYV GCQSWETALI VQAFCSTGLT EEFCSTLQKA HQFLQNAQIT EDIPNYKSYY
501: RERTKGSWTL SNGENVWAIA DTNAEALKAI LLLSDIPSEL VGNTIKQERL YDAIDCLLSF VNKDGTLSSA ECKRTTSWVE FINPSESFRN IIVDYPYPEC
601: TSSLIQVLIL FRDKCPMYRR EEIDKIIKSG ASFIEKVQRK DGSWYGSWAV CFTYATFFGI KGLADAGRTY QNSLPIRKAC NFLLSKQLAT GGWGESYLSC
701: QTEEYVDSGR PHAVQTAQAM LALLYAGQVE QDPAPLYRAA KELINMQMEN GEFPQQEIVG NFNSSLFFNY PNFRNLFPIW ALGEFRRRLL AKKS
101: CALNRYTKQN LHSTNLPSIK IDNDSEATGE TILAVLRRAL SQFSSLQGPD GHWPGGYSGI LFILPLMIFA LHVTRSLHEV LSIEHIHEIC RYIYNIQNED
201: GGWGTHTLGP SSMFGTCVNY ATLRILGEVL DGENDALSKG RAWILSHGTA TAAPQWAKIY LSVVGAYDWS GNNAIIPELW MLPHFLPIHP GRFWCFCRMV
301: YMPMAYIYGK KFVGPITPTI LAIRNEIYNI PYNEIDWNKA RNSCAKEDLI YRRSWLQSVA LAYLNNFVEP LSNLWPMNKL RERAMSNLME HIHYEDENSN
401: YVGLCPINKV LNMICCWIEK PNSHEFRQHL PRIHDFLWIA EDGMKSKVYV GCQSWETALI VQAFCSTGLT EEFCSTLQKA HQFLQNAQIT EDIPNYKSYY
501: RERTKGSWTL SNGENVWAIA DTNAEALKAI LLLSDIPSEL VGNTIKQERL YDAIDCLLSF VNKDGTLSSA ECKRTTSWVE FINPSESFRN IIVDYPYPEC
601: TSSLIQVLIL FRDKCPMYRR EEIDKIIKSG ASFIEKVQRK DGSWYGSWAV CFTYATFFGI KGLADAGRTY QNSLPIRKAC NFLLSKQLAT GGWGESYLSC
701: QTEEYVDSGR PHAVQTAQAM LALLYAGQVE QDPAPLYRAA KELINMQMEN GEFPQQEIVG NFNSSLFFNY PNFRNLFPIW ALGEFRRRLL AKKS
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.