CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

cytosol 2
golgi 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g03000.t01	Wine grape	cytosol	48.74	31.6
CDY29789	Canola	cytosol	14.57	29.59
VIT_09s0054g01180.t01	Wine grape	cytosol	59.3	18.35
EES06259	Sorghum	cytosol	66.33	17.44
VIT_11s0065g00640.t01	Wine grape	cytosol	65.33	17.11
OQU83221	Sorghum	cytosol	65.83	17.1
AT2G07050.1	Thale cress	cytosol	64.82	17.0
EES06258	Sorghum	cytosol	63.32	16.56
VIT_09s0054g01120.t01	Wine grape	cytosol	58.29	16.29
KRH74134	Soybean	endoplasmic reticulum	61.81	16.25
CDX77512	Canola	cytosol	62.81	16.09
CDY50938	Canola	cytosol	61.31	15.99
CDX85104	Canola	cytosol	61.31	15.97
VIT_09s0054g01550.t01	Wine grape	cytosol	60.3	15.83
Bra013167.1-P	Field mustard	cytosol	60.8	15.78
CDX93093	Canola	cytosol	60.8	15.76
VIT_09s0018g00630.t01	Wine grape	cytosol	59.3	15.57
EES04501	Sorghum	cytosol	57.29	15.43
Solyc04g070980.2.1	Tomato	plastid	58.79	15.39
Zm00001d008671_P001	Maize	cytosol	39.7	14.91
VIT_09s0054g01110.t01	Wine grape	cytosol	59.3	14.82
Bra014952.1-P	Field mustard	cytosol	62.81	14.81
OQU80182	Sorghum	mitochondrion	51.76	14.15
OQU80191	Sorghum	cytosol, mitochondrion	52.26	13.81
EER90340	Sorghum	cytosol	50.75	13.76
EES14558	Sorghum	cytosol	52.26	13.72
KXG24790	Sorghum	cytosol, mitochondrion	53.77	13.49
KXG28793	Sorghum	mitochondrion	50.75	13.19
KXG23805	Sorghum	cytosol	48.74	12.81
VIT_09s0054g01090.t01	Wine grape	cytosol	60.8	12.75
OQU91432	Sorghum	cytosol	50.75	12.72
EES13537	Sorghum	cytosol	47.74	12.47
EES17376	Sorghum	mitochondrion	47.24	12.4
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.05	10.36
OQU77014	Sorghum	cytosol	33.17	9.95
GSMUA_Achr7P15790_001	Banana	cytosol	25.63	8.4
KXG29446	Sorghum	endoplasmic reticulum, extracellular	23.12	7.15
VIT_04s0008g02980.t01	Wine grape	mitochondrion	5.53	7.05
KXG35171	Sorghum	extracellular	18.09	5.71
KXG28324	Sorghum	cytosol	6.03	4.36
VIT_09s0054g01250.t01	Wine grape	cytosol	4.02	2.69
KXG29303	Sorghum	cytosol	1.01	2.44
PGSC0003DMT400048787	Potato	cytosol	0.5	1.72
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.5	1.47
PGSC0003DMT400073861	Potato	mitochondrion	1.01	0.41
VIT_04s0008g02990.t01	Wine grape	cytosol	0.0	0.0
Solyc04g050670.1.1	Tomato	cytosol	0.0	0.0
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:EES08419	EnsemblPlantsGene:SORBI_3005G109400	Gene3D:1.50.10.20	InterPro:SQ_cyclase_N	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	PFAM:PF13249	ProteinID:EES08419	ProteinID:EES08419.1	RefSeq:XP_002449431.1	SUPFAM:SSF48239
UniParc:UPI0001A86583	UniProt:C5Y243	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:22681719..22684606

Molecular Weight (calculated)

22267.6 Da

IEP (calculated)

7.767

GRAVY (calculated)

-0.379

Length

199 amino acids

Sequence
(BLAST)

001: MWKLTVGEGG SPMLRSTNRF SGRTVWEFDP DLGTPEQRAD VEKARRDFSD YRFQRRHSAD VLMRMQYAKA NPLKLDLPAV KIGENEDVTV EAVLSSLKRA
101: MNHLATLQAH DGHWPGDCSG PLFLLPGLNK DGGWGLHIEG HSTMFGTTLN YVTLRLIGEG PNSGDGAMEK GRNWILERGG AIYTTSWGKF WLTFLFAII

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.