CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015234_P002	Maize	cytosol	94.06	93.44
Zm00001d053889_P004	Maize	cytosol	92.34	91.97
EES06258	Sorghum	cytosol	91.68	91.2
TraesCS6A01G110800.1	Wheat	cytosol, golgi	88.77	88.42
TraesCS6B01G139000.1	Wheat	golgi	88.51	88.16
Os02t0139700-01	Rice	cytosol	88.11	87.88
KXG29303	Sorghum	cytosol	9.11	84.15
TraesCS6D01G099400.2	Wheat	cytosol	88.24	83.92
HORVU6Hr1G019840.10	Barley	mitochondrion	86.39	82.68
GSMUA_Achr7P15790_001	Banana	cytosol	63.8	79.57
KRH74134	Soybean	endoplasmic reticulum	75.83	75.83
PGSC0003DMT400073861	Potato	mitochondrion	49.01	75.25
AT2G07050.1	Thale cress	cytosol	75.3	75.1
VIT_11s0065g00640.t01	Wine grape	cytosol	74.9	74.61
KXG28324	Sorghum	cytosol	27.08	74.55
CDY50938	Canola	cytosol	74.64	74.05
Bra013167.1-P	Field mustard	cytosol	74.5	73.53
CDX93093	Canola	cytosol	74.5	73.44
VIT_09s0054g01550.t01	Wine grape	cytosol	72.39	72.3
VIT_09s0018g00630.t01	Wine grape	cytosol	72.26	72.16
CDX85104	Canola	cytosol	72.79	72.12
CDX77512	Canola	cytosol	73.98	72.07
VIT_09s0054g01180.t01	Wine grape	cytosol	60.63	71.38
VIT_09s0054g01120.t01	Wine grape	cytosol	66.97	71.21
Solyc04g070980.2.1	Tomato	plastid	71.47	71.18
VIT_09s0054g01250.t01	Wine grape	cytosol	27.74	70.71
VIT_09s0054g01110.t01	Wine grape	cytosol	73.45	69.85
OQU83221	Sorghum	cytosol	69.48	68.67
Solyc04g050670.1.1	Tomato	cytosol	14.27	66.67
EES08419	Sorghum	cytosol, mitochondrion, plastid	17.44	66.33
Bra014952.1-P	Field mustard	cytosol	71.07	63.74
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.42	60.29
VIT_09s0054g01090.t01	Wine grape	cytosol	74.64	59.54
KXG29446	Sorghum	endoplasmic reticulum, extracellular	50.2	59.1
EER90340	Sorghum	cytosol	56.14	57.9
OQU80191	Sorghum	cytosol, mitochondrion	56.8	57.1
OQU77014	Sorghum	cytosol	49.01	55.96
OQU80182	Sorghum	mitochondrion	53.37	55.49
EES14558	Sorghum	cytosol	55.48	55.41
KXG28793	Sorghum	mitochondrion	56.01	55.35
EES13537	Sorghum	cytosol	55.35	54.99
KXG35171	Sorghum	extracellular	45.18	54.2
KXG24790	Sorghum	cytosol, mitochondrion	56.01	53.47
EES04501	Sorghum	cytosol	52.05	53.32
VIT_04s0008g03000.t01	Wine grape	cytosol	21.27	52.44
KXG23805	Sorghum	cytosol	52.05	52.05
EES17376	Sorghum	mitochondrion	51.92	51.85
OQU91432	Sorghum	cytosol	53.24	50.76
PGSC0003DMT400048787	Potato	cytosol	3.7	48.28
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.78	47.44
VIT_04s0008g02990.t01	Wine grape	cytosol	5.42	43.62
PGSC0003DMT400062376	Potato	extracellular, vacuole	11.1	43.52
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.61	36.28
CDY29789	Canola	cytosol	4.23	32.65

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	UniProt:C5XUJ6	EnsemblPlants:EES06259	ProteinID:EES06259
ProteinID:EES06259.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	EnsemblPlantsGene:SORBI_3004G037200	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	unigene:Sbi.4324	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001A8597A	RefSeq:XP_002453283.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:2982065..2990333

Molecular Weight (calculated)

85924.5 Da

IEP (calculated)

6.333

GRAVY (calculated)

-0.296

Length

757 amino acids

Sequence
(BLAST)

001: MWRLRITEGG GDPWLRTKNA HVGRQVWEFD AAADPDPAVD AARRAFVDTR RQLKHSADLL MRIQFAKENP LELDLPAIKL GEHEDVTEEA VSTTLKRAIS
101: RFSTLQAHDG HWPGDYGGPM FLMPGLIITL YVTGALNTVL SPEHQKEIRR YLYNHQNEDG GWGLHIEGPS TMFGSALTYV ILRLLGEGPD SGDGAMEKGR
201: NWILDHGGAT YITSWGKFWL SVLGVFEWSG NNPVPPEVWL LPYLLPFHPG RMWCHCRMVY LPMCYIYGKR FVGRITPLLL ELRKELFKEP YNKIDWDKAR
301: NLCAKEDLYY PHPFVQDVLW ATLHKFVEPV MMHWPGSKLR EKALETVMQH VHYEDENTRY ICIGPVNKVL NMLACWIEDP NSEAFKLHIP RVYDYLWLAE
401: DGMKMQGYNG SQLWDTAFAV QAIVATNLIE EFGPTLKLAH NYIKNSQVLD DCPGDLDDWY RHTSKGAWPF STADHGWPIS DCTAEGLKAS LLLSKISPKI
501: VGEPVEANRF YDAVSCLMSY MNDNGGFATY ELTRSYPWLE LINPAETFGD IVIDYPYVEC TSAAIQALTS FKKLYPGHRR KEVDSCISKA SNFIESIQKS
601: DGSWYGSWAV CFTYGTWFGV KGLIAAGRTF ENSPAIRKAC DFLLSKELPS GGWGESYLSS QDQVYTNLKG NRPHAVNTSW AMLALIDAGQ AERDPTPLHR
701: AAKVLINLQS EDGEFPQQEI IGVFNKNCMI SYSQYRNTFP IWALGEYRCR VLASGKQ

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.