Factsheet for Zm00001d053889_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015234_P002	Maize	cytosol	94.74	94.49
EES06259	Sorghum	cytosol	91.97	92.34
EES06258	Sorghum	cytosol	87.37	87.25
TraesCS6A01G110800.1	Wheat	cytosol, golgi	84.87	84.87
TraesCS6B01G139000.1	Wheat	golgi	84.61	84.61
Os02t0139700-01	Rice	cytosol	84.21	84.32
TraesCS6D01G099400.2	Wheat	cytosol	84.74	80.9
GSMUA_Achr7P15790_001	Banana	cytosol	63.68	79.74
HORVU6Hr1G019840.10	Barley	mitochondrion	82.5	79.27
KRH74134	Soybean	endoplasmic reticulum	73.29	73.58
PGSC0003DMT400073861	Potato	mitochondrion	47.5	73.23
AT2G07050.1	Thale cress	cytosol	72.37	72.46
VIT_11s0065g00640.t01	Wine grape	cytosol	71.97	71.97
CDY50938	Canola	cytosol	71.58	71.3
Zm00001d035392_P001	Maize	cytosol	21.84	70.94
Bra013167.1-P	Field mustard	cytosol	71.45	70.8
CDX93093	Canola	cytosol	71.45	70.7
VIT_09s0054g01120.t01	Wine grape	cytosol	66.05	70.51
VIT_09s0054g01180.t01	Wine grape	cytosol	59.61	70.45
Zm00001d008672_P001	Maize	cytosol	10.79	70.09
CDX85104	Canola	cytosol	70.26	69.9
VIT_09s0054g01250.t01	Wine grape	cytosol	27.11	69.36
VIT_09s0018g00630.t01	Wine grape	cytosol	69.08	69.26
VIT_09s0054g01550.t01	Wine grape	cytosol	69.08	69.26
CDX77512	Canola	cytosol	70.79	69.24
Solyc04g070980.2.1	Tomato	plastid	68.55	68.55
Zm00001d008671_P001	Maize	cytosol	47.63	68.3
Zm00001d008674_P001	Maize	mitochondrion	46.18	67.76
VIT_09s0054g01110.t01	Wine grape	cytosol	70.39	67.21
Solyc04g050670.1.1	Tomato	cytosol	13.95	65.43
Bra014952.1-P	Field mustard	cytosol	70.0	63.03
Zm00001d050625_P001	Maize	mitochondrion	50.13	57.38
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.13	57.35
VIT_09s0054g01090.t01	Wine grape	cytosol	71.18	57.01
Zm00001d015239_P007	Maize	mitochondrion	56.97	56.82
Zm00001d030821_P001	Maize	cytosol	5.39	54.67
Zm00001d052971_P005	Maize	mitochondrion	54.34	54.63
Zm00001d014695_P001	Maize	cytosol	54.47	53.49
VIT_04s0008g03000.t01	Wine grape	cytosol	21.58	53.42
Zm00001d024337_P001	Maize	cytosol	48.03	50.48
Zm00001d013798_P001	Maize	mitochondrion	49.08	49.54
Zm00001d030822_P001	Maize	cytosol	12.89	49.49
Zm00001d035389_P001	Maize	cytosol, nucleus, peroxisome	37.89	49.4
Zm00001d030819_P005	Maize	cytosol	23.95	48.4
PGSC0003DMT400048787	Potato	cytosol	3.68	48.28
Zm00001d030813_P001	Maize	cytosol	15.53	47.97
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.47	46.15
Zm00001d030824_P001	Maize	cytosol	19.74	45.87
VIT_04s0008g02990.t01	Wine grape	cytosol	5.53	44.68
Zm00001d030814_P001	Maize	cytosol	15.53	44.19
Zm00001d030818_P001	Maize	cytosol	12.89	43.36
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.66	41.97
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.26	35.81
CDY29789	Canola	cytosol	4.47	34.69

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:103654926	MapMan:9.1.4.3	MapMan:9.1.5.3	UniProt:A0A1D6QT72	ProteinID:AQK60644.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	PFAM:PF13243	PFAM:PF13249
ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239
InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00084247C3	EnsemblPlantsGene:Zm00001d053889
EnsemblPlants:Zm00001d053889_P004	EnsemblPlants:Zm00001d053889_T004	SEG:seg	:	:	:

Description

cycloartenol synthase1 cycloartenol synthase1

Coordinates

chr4:+:243042533..243050543

Molecular Weight (calculated)

85529.1 Da

IEP (calculated)

6.402

GRAVY (calculated)

-0.240

Length

760 amino acids

Sequence
(BLAST)

001: MWRLRIAEGG GDPWLRTKNA HVGRQVWEFD ASADPDPAVD AARRAFAGSR GHLKHSADLL MRIQFAKENP LELDLPAIKL GEHEDVTEEA VSTTLRRAIS
101: RLSTLQAHDG HWPGDYGGPM FLMPGLLLIV IILYPDHNIV CDWSTKHCLV IRTPEGDPSN EDGGWGLHIE GPSTMFGSAL TYVTLRLLGE GPDSGDGAME
201: KGRNWILDHG GATYITSWGK FWLSVLGVFE WSGNNPVPPE VWLLPYLLPF HPGRMWCHCR MVYLPMCYIY GKRFVGRITP LVLELRKELF KDPYSKIDWD
301: KARNLCAKED LYYPHPFVQD VLWATLHKFV EPVMMSWPGS KLREKALETA MQHVHYEDEN TRYICIGPVN KVLNMLACWI EDPNSEAFKL HIPRVYDYLW
401: LAEDGMKMQG YNGSQLWDTA FIVQAIVATN LTEEFGPTLK LAHNYIKKSQ VLDDCPGDLN DWYRHTSKGA WPFSTADHGW PISDCTAEGL KASLLLSKIS
501: PEIVGGPIEA NRFYDAVSCL MSYMNDNGGF ATYELTRSYA WLELINPAET FGDIVIDYPY VECTSAAIQA LTSFRKLYPG HRRKEVDSCI SKAANFIESI
601: QKSDGSWYGS WAVCFTYGTW FGVKGLIAAG RTFESSPAIR KACGFLLSKE LPSGGWGESY LSSQDQVYTN LKGNRAHAAN TGWAMLALID AGQAQRDPAP
701: LHRAAKVLIN LQSEDGEFPQ QEIIGVFNKN CMISYSQYRN TFPIWALGEY RCRVLGAGKR

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.