CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013167.1-P	Field mustard	cytosol	98.69	98.17
CDX93093	Canola	cytosol	98.69	98.05
AT2G07050.1	Thale cress	cytosol	92.53	93.02
CDX85104	Canola	cytosol	87.16	87.04
CDX77512	Canola	cytosol	88.47	86.87
CDX85103	Canola	cytosol	11.53	83.02
VIT_11s0065g00640.t01	Wine grape	cytosol	80.21	80.53
KRH74134	Soybean	endoplasmic reticulum	78.9	79.52
PGSC0003DMT400073861	Potato	mitochondrion	49.67	76.88
Solyc04g070980.2.1	Tomato	plastid	75.23	75.53
Os02t0139700-01	Rice	cytosol	74.44	74.84
EES06259	Sorghum	cytosol	74.05	74.64
TraesCS6A01G110800.1	Wheat	cytosol, golgi	73.79	74.08
TraesCS6B01G139000.1	Wheat	golgi	73.66	73.95
Zm00001d015234_P002	Maize	cytosol	71.56	71.65
Zm00001d053889_P004	Maize	cytosol	71.3	71.58
EES06258	Sorghum	cytosol	71.3	71.48
TraesCS6D01G099400.2	Wheat	cytosol	73.39	70.35
TraesCS2B01G407300.1	Wheat	cytosol	40.5	70.07
Os02t0139500-02	Rice	cytosol	32.5	70.06
Solyc04g050670.1.1	Tomato	cytosol	14.81	69.75
HORVU6Hr1G019840.10	Barley	mitochondrion	71.69	69.15
TraesCS2D01G387000.1	Wheat	cytosol, plastid	69.33	68.35
TraesCS6A01G110200.1	Wheat	mitochondrion	67.37	68.17
TraesCS6B01G138500.1	Wheat	cytosol	63.7	67.5
TraesCS6D01G098800.1	Wheat	mitochondrion	67.37	67.19
TraesCS5D01G011800.1	Wheat	mitochondrion	64.61	64.95
TraesCS5A01G004900.1	Wheat	mitochondrion	64.48	64.82
TraesCS5D01G006600.1	Wheat	cytosol	64.09	64.34
TraesCS5D01G006700.1	Wheat	cytosol	63.43	63.68
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	52.95	63.42
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	62.78	63.28
CDY40048	Canola	cytosol	6.55	61.73
Zm00001d008674_P001	Maize	mitochondrion	41.68	61.39
TraesCS2B01G407200.1	Wheat	cytosol	6.03	61.33
EES08419	Sorghum	cytosol, mitochondrion, plastid	15.99	61.31
TraesCS6D01G098600.1	Wheat	cytosol	68.15	61.25
Zm00001d008671_P001	Maize	cytosol	42.46	61.13
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	14.15	61.02
KXG29303	Sorghum	cytosol	6.55	60.98
TraesCS5B01G004800.1	Wheat	cytosol	58.98	60.57
CDX87419	Canola	cytosol	58.85	58.69
CDY72111	Canola	cytosol	31.06	57.52
CDX79277	Canola	cytosol	51.25	56.91
CDY57947	Canola	cytosol	57.01	56.71
CDX88494	Canola	endoplasmic reticulum, plasma membrane	57.41	56.44
CDX87420	Canola	cytosol	56.23	55.86
CDX88493	Canola	cytosol	56.23	55.14
CDY35103	Canola	mitochondrion	55.83	54.06
CDY49432	Canola	cytosol	47.44	49.79
CDY52589	Canola	cytosol	47.31	49.66
CDY20916	Canola	cytosol	16.38	49.41
CDY20917	Canola	cytosol	26.08	48.54
CDY38925	Canola	cytosol, nucleus, plasma membrane	46.79	48.51
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	31.45	47.52
CDY25386	Canola	cytosol, plasma membrane, plastid	35.65	46.42
CDY25392	Canola	cytosol	45.74	45.86
CDY29797	Canola	cytosol	45.61	45.73
CDY08878	Canola	cytosol	10.22	42.16
CDX89541	Canola	cytosol	7.86	40.82
CDY29789	Canola	cytosol	4.46	34.69
CDY34478	Canola	cytosol, extracellular	16.51	33.78
CDY63677	Canola	cytosol	3.28	26.32

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	GO:A0A078IPE6	UniProt:A0A078IPE6	EnsemblPlants:CDY50938
ProteinID:CDY50938	ProteinID:CDY50938.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	EnsemblPlantsGene:GSBRNA2T00097796001	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EED001	:	:	:

Description

BnaC03g74380DTerpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A078IPE6]

Coordinates

chrLK032950:+:11266..16326

Molecular Weight (calculated)

86399.0 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.296

Length

763 amino acids

Sequence
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEELAA VEEARKSFRE NRFAKKHSSD LLMRLQFSRE NLSRPVLPQV NVKDGDDVTE KMVETTLKRG
101: VDFYSTIQAS DGHWAGDYGG PMFLLPGLII TLSITGALNT VLSEQHKSEM RRYLHNHQAN TYNEDGGWGL HIEGPSTMFG SVLNYVTLRL LGEGPNDGDG
201: AMEKGRDWIL NHGGATNITS WGKMWLSVLG AFEWSGNNPL PPEIWLLPYF LPIHPGRMWC HCRMVYLPMS YLYGKRFVGP ITSTVLSLRK ELFTVPYHEV
301: DWNEARNLCA KEDLYYPHPL VQDILWASLH KIVEPVLTRW PGANLREKAL RTTLEHIHYE DENTRYICIG PVNKVLNMLC CWVEDPNSEA FKLHLPRIHD
401: YLWVAEDGMK MQGYNGSQLW DTSFAVQAVL ATNFVEEYGP VLKKAHSYVK NSQVSEDCPG DLSYWYRHIS KGAWPFSTAD HGWPISDCTA EGLKAALLLS
501: KVPKEIVGEP VDTKRLYDAV NVIISLQNAD GGFATYELTR SYPWLELINP AETFGDIVID YPYVECTSAA IQALIAFRKL YPGHRKKEVD ECIEKAVKFI
601: ESIQESDGSW YGSWAVCFTY GTWFGVKGLE AAGKTLKNSP TVAKACEFLL SKQLPSGGWG ESYLSCQDKV YSNLDGNRSH VVNTAWALLS LIGAGQVEVD
701: QKPLHRAARY LINAQMESGD FPQQEIMGVF NRNCMITYAA YRNIFPIWAL GEYRSKVLLQ QGE

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.