Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003630.1-P | Field mustard | cytosol | 99.48 | 99.48 |
| CDX79277 | Canola | cytosol | 84.09 | 93.89 |
| CDX87419 | Canola | cytosol | 90.48 | 90.72 |
| CDX88494 | Canola | endoplasmic reticulum, plasma membrane | 89.57 | 88.53 |
| CDY40048 | Canola | cytosol | 8.87 | 83.95 |
| CDY72111 | Canola | cytosol | 39.11 | 72.82 |
| CDX87420 | Canola | cytosol | 71.71 | 71.61 |
| CDX88493 | Canola | cytosol | 72.23 | 71.21 |
| CDY35103 | Canola | mitochondrion | 73.14 | 71.19 |
| CDY20916 | Canola | cytosol | 22.03 | 66.8 |
| CDY20917 | Canola | cytosol | 34.42 | 64.39 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 13.43 | 59.88 |
| Solyc12g035460.1.1 | Tomato | cytosol | 17.34 | 59.11 |
| CDY49432 | Canola | cytosol | 54.76 | 57.77 |
| CDY52589 | Canola | cytosol | 54.63 | 57.63 |
| CDY50938 | Canola | cytosol | 56.71 | 57.01 |
| CDX93093 | Canola | cytosol | 56.98 | 56.9 |
| CDX85104 | Canola | cytosol | 55.93 | 56.15 |
| CDX77512 | Canola | cytosol | 56.84 | 56.11 |
| CDY38925 | Canola | cytosol, nucleus, plasma membrane | 53.45 | 55.71 |
| CDY29797 | Canola | cytosol | 53.32 | 53.75 |
| CDX89541 | Canola | cytosol | 10.3 | 53.74 |
| CDY25392 | Canola | cytosol | 52.8 | 53.22 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 40.16 | 52.56 |
| CDX89540 | Canola | endoplasmic reticulum, golgi, plastid | 34.55 | 52.48 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 51.37 | 52.05 |
| CDX85103 | Canola | cytosol | 7.17 | 51.89 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 51.11 | 51.65 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 50.72 | 51.25 |
| Os08t0223900-00 | Rice | cytosol | 51.24 | 50.06 |
| CDY08878 | Canola | cytosol | 11.99 | 49.73 |
| EES13537 | Sorghum | cytosol | 49.15 | 49.48 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 46.81 | 48.71 |
| Zm00001d024337_P001 | Maize | cytosol | 45.63 | 48.41 |
| CDY29789 | Canola | cytosol | 6.0 | 46.94 |
| CDY34478 | Canola | cytosol, extracellular | 22.56 | 46.38 |
| CDY63677 | Canola | cytosol | 4.69 | 37.89 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | GO:A0A078J5H1 | UniProt:A0A078J5H1 | EnsemblPlants:CDY57947 | ProteinID:CDY57947 |
| ProteinID:CDY57947.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 | GO:GO:0016866 | EnsemblPlantsGene:GSBRNA2T00022876001 |
| PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0004EEE03A | SEG:seg | : | : | : | : |
Description
BnaA07g38460DTerpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A078J5H1]
Coordinates
chrLK033618:+:29352..34215
Molecular Weight (calculated)
87902.2 Da
IEP (calculated)
6.363
GRAVY (calculated)
-0.286
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIGEGN GEDPYLSSTN NFVGRQTWEF DPKAGTPEER AAVEEARRSF LVNRYRVKGC SDLFWRMQFL KEARFEQVIP PVKIDGDEAI THENATNALR
101: RGVSFFSALQ ASDGHWPGEI TGPLFFLPPL VFCLYITGHL EKVFDEEHRK EMLRHVYCHQ NEDGGWGLHV ESKSIMFCTA LNYICLRILG EGPNGGRDNA
201: CKRARQWILD RGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFL PIHLAKTLCY CRMVYMPMSY LYGKRFVGPI TPLILQLRDE LLLQPYEAIN
301: WNKTRRLYAK EDMYFPHPWV QDLVWDALNV FVEPFLTRWP LNKLVREKAC RLAMKHIHYE DENSHYITIG CVEKVLCMLA CWIDNPHGDY FKKHLARIPD
401: YMWVAEDGMK MQSFGSQLWD TGFAVQAILA SDLLDETSNV LKKGHDYIKL SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCLLLST
501: MPSEVVGQQL DPEQIYDSVN LLLSFQSEKG GVTAWEPVRA YEWIEFLNPT EFLANLVAER EYVECTSSVI QALVLFNQLY PDHRTKEISR SIEKAVHYLE
601: NEQKPDGSWY GNWGVCFIYA TWFALGGLAA AGKTYEKSLA MRKGVEFLLR TQKDDGGWGE SYLSCPEERY IPSEGKQSNL VQTAWAMLGL IHAGQAGSDP
701: IPLHRAAKLI INSQMEDGDF PQQEIVGVFM KNCLIHYATY RNTFPLWALA EYRKAAFPNS STTSTAS
101: RGVSFFSALQ ASDGHWPGEI TGPLFFLPPL VFCLYITGHL EKVFDEEHRK EMLRHVYCHQ NEDGGWGLHV ESKSIMFCTA LNYICLRILG EGPNGGRDNA
201: CKRARQWILD RGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFL PIHLAKTLCY CRMVYMPMSY LYGKRFVGPI TPLILQLRDE LLLQPYEAIN
301: WNKTRRLYAK EDMYFPHPWV QDLVWDALNV FVEPFLTRWP LNKLVREKAC RLAMKHIHYE DENSHYITIG CVEKVLCMLA CWIDNPHGDY FKKHLARIPD
401: YMWVAEDGMK MQSFGSQLWD TGFAVQAILA SDLLDETSNV LKKGHDYIKL SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCLLLST
501: MPSEVVGQQL DPEQIYDSVN LLLSFQSEKG GVTAWEPVRA YEWIEFLNPT EFLANLVAER EYVECTSSVI QALVLFNQLY PDHRTKEISR SIEKAVHYLE
601: NEQKPDGSWY GNWGVCFIYA TWFALGGLAA AGKTYEKSLA MRKGVEFLLR TQKDDGGWGE SYLSCPEERY IPSEGKQSNL VQTAWAMLGL IHAGQAGSDP
701: IPLHRAAKLI INSQMEDGDF PQQEIVGVFM KNCLIHYATY RNTFPLWALA EYRKAAFPNS STTSTAS
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.