CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026038.1-P	Field mustard	cytosol	95.81	99.74
CDY72111	Canola	cytosol	49.87	95.39
CDY40048	Canola	cytosol	9.77	95.06
CDX87419	Canola	cytosol	71.57	73.73
CDY57947	Canola	cytosol	71.19	73.14
CDX88494	Canola	endoplasmic reticulum, plasma membrane	70.56	71.65
CDX79277	Canola	cytosol	62.18	71.32
CDX87420	Canola	cytosol	68.4	70.18
CDX88493	Canola	cytosol	68.78	69.67
CDY20916	Canola	cytosol	20.05	62.45
CDY08878	Canola	cytosol	14.34	61.08
CDY20917	Canola	cytosol	30.46	58.54
CDY49432	Canola	cytosol	53.81	58.32
CDY52589	Canola	cytosol	53.68	58.18
CDY38925	Canola	cytosol, nucleus, plasma membrane	52.92	56.66
Solyc12g035460.1.1	Tomato	cytosol	16.12	56.44
CDY50938	Canola	cytosol	54.06	55.83
CDX93093	Canola	cytosol	53.81	55.21
Solyc12g035450.1.1	Tomato	cytosol, plasma membrane, plastid	11.93	54.65
CDY25392	Canola	cytosol	52.66	54.53
CDX89541	Canola	cytosol	10.15	54.42
CDY29797	Canola	cytosol	52.28	54.14
CDX85104	Canola	cytosol	52.41	54.06
CDX77512	Canola	cytosol	53.3	54.05
CDY25386	Canola	cytosol, plasma membrane, plastid	39.72	53.41
TraesCS4A01G495100.1	Wheat	cytosol	51.02	53.1
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	33.76	52.67
TraesCS7A01G003500.1	Wheat	cytosol	50.25	52.17
EES13537	Sorghum	cytosol	50.38	52.1
TraesCS7D01G004000.1	Wheat	cytosol	50.13	52.04
CDY29789	Canola	cytosol	6.47	52.04
Os08t0223900-00	Rice	cytosol	50.63	50.83
Zm00001d024337_P001	Maize	cytosol	46.45	50.62
CDX85103	Canola	cytosol	6.73	50.0
HORVU7Hr1G000400.1	Barley	cytosol, plastid	46.57	49.8
CDY63677	Canola	cytosol	5.71	47.37
CDY34478	Canola	cytosol, extracellular	20.56	43.43

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:A0A078HE70	UniProt:A0A078HE70	EnsemblPlants:CDY35103	ProteinID:CDY35103
ProteinID:CDY35103.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	EnsemblPlantsGene:GSBRNA2T00057980001
PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EED17A	:	:	:	:	:

Description

BnaA06g11130DTerpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A078HE70]

Coordinates

chrLK032346:+:267228..273268

Molecular Weight (calculated)

90969.9 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.348

Length

788 amino acids

Sequence
(BLAST)

001: MWHLPGLYHL LHSKAIPSVH RRTIPTHHFG KMWRLNIGEG RGEDNPYLIS TNNFAGRQIW EFDPNAGTSE ELFAVEEARR TFYNCRHRVK ACGDLLWRMQ
101: FLKEKKFEQV IPPVKVDDAQ RITKEEATNA LRRSVHYFSA LQSSDGHWPA EITGPLFYVP VMVFCFYITG HLDEMFTKEH RKEMLRYIYC HQNEDGGWGL
201: HIEGKSGMFC TALNYICLRI LGEGPDGGPR NACKRARQWI LDHGGVTYIP SWGKSWLSIL GIYDWSGTNP MPPEIWLLPS WLPIHLGKTT CFCRLVYLVT
301: SYFYGKRFVG PITPLILQLR EELYVQPYEE IDWNKARRSY AKEDMYYPHP SIQDFVWDSL HVFGEPLLTR WPLNKLVREK ALKVVVDYIH YEDENSRYIN
401: IGCAGKAMCV LASWVEDPNG EYFKKHLARV PDYFWIAEDG MKVQSFGSQL WDTSLAIQAL LASNMSNETA HVLKKGHDFI KRSQIRENPS GDFKKMNRHI
501: SKGGWTFSDR DQGWNVSDCS AEAFKCCLLL SKMPPDVVGP RMDPEQLYDS VNLLLSYQSE NGGMTAWEPA RGYGWLELFN PTEMLADLVI EREYVECTSS
601: VIQALIMFKK LYPDHRTREI DRTIEKAVQF IENTQEADGS WYGSWGVCYT YATWFALEGL VAVGKTYENC LAIREGVAFL LKKQNSSGGW GESYLSCSEK
701: RYIELEGGRS NLVQTAWALM GLIQTGQAER DPVPLHRAAK LIINSQLENG DYPQQEMTGV FMKNCFLNYV TYRNIFPIWA LAEYRKVI

Best Arabidopsis Sequence Match ( AT1G78960.2 )
(BLAST)

001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL

Arabidopsis Description

LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.