CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	98.64	95.53
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	62.64	91.29
AT5G36150.1	Thale cress	cytosol	78.94	76.45
CDY49432	Canola	cytosol	72.83	73.73
CDY52589	Canola	cytosol	72.69	73.59
AT3G29255.1	Thale cress	cytosol	69.84	72.8
CDX89541	Canola	cytosol	13.86	69.39
CDY25392	Canola	cytosol	71.74	69.38
CDY29797	Canola	cytosol	71.47	69.12
CDY25386	Canola	cytosol, plasma membrane, plastid	54.21	68.09
CDY29789	Canola	cytosol	8.56	64.29
CDY40048	Canola	cytosol	7.07	64.2
KRH46975	Soybean	endoplasmic reticulum	57.61	55.64
CDX87420	Canola	cytosol	57.74	55.34
VIT_09s0054g01210.t01	Wine grape	cytosol	56.66	55.09
KRH44692	Soybean	endoplasmic reticulum	56.66	54.72
KRH66671	Soybean	cytosol	56.52	54.59
CDX87419	Canola	cytosol	56.52	54.38
CDX88493	Canola	cytosol	57.47	54.37
CDY72111	Canola	cytosol	30.3	54.13
KRH66676	Soybean	cytosol	46.06	53.81
KRH66677	Soybean	cytosol	9.92	53.68
CDY57947	Canola	cytosol	55.71	53.45
CDX88494	Canola	endoplasmic reticulum, plasma membrane	55.98	53.09
CDY35103	Canola	mitochondrion	56.66	52.92
KRH11342	Soybean	cytosol	49.18	52.01
KRH10719	Soybean	cytosol	32.07	51.75
CDX79277	Canola	cytosol	47.55	50.95
CDY20916	Canola	cytosol	17.39	50.59
CDY50938	Canola	cytosol	48.51	46.79
CDX93093	Canola	cytosol	48.37	46.35
TraesCS7A01G003500.1	Wheat	cytosol	47.69	46.25
TraesCS4A01G495100.1	Wheat	cytosol	47.55	46.24
TraesCS7D01G004000.1	Wheat	cytosol	47.55	46.11
EES13537	Sorghum	cytosol	47.01	45.41
CDX77512	Canola	cytosol	47.83	45.3
CDX85104	Canola	cytosol	46.6	44.9
HORVU7Hr1G000400.1	Barley	cytosol, plastid	44.43	44.37
Zm00001d024337_P001	Maize	cytosol	43.34	44.12
Os08t0223900-00	Rice	cytosol	46.47	43.57
CDY20917	Canola	cytosol	24.05	43.17
CDY08878	Canola	cytosol	9.38	37.3
CDX85103	Canola	cytosol	5.3	36.79
CDY34478	Canola	cytosol, extracellular	16.44	32.44
CDY63677	Canola	cytosol	3.4	26.32

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:A0A078HK86	UniProt:A0A078HK86	EnsemblPlants:CDY38925	ProteinID:CDY38925
ProteinID:CDY38925.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	EnsemblPlantsGene:GSBRNA2T00066964001
PFAM:PF13243	PFAM:PF13249	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EF1C32	SEG:seg

Description

BnaA04g13460DTerpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A078HK86]

Coordinates

chrLK032435:-:59248..63678

Molecular Weight (calculated)

84597.3 Da

IEP (calculated)

5.525

GRAVY (calculated)

-0.236

Length

736 amino acids

Sequence
(BLAST)

001: MWKLRIGAEA GQDPYLFSTN NYLGRQIWEF DADAGSAEEL AEVEEARRNF AANRSHYKAS ADLLWRMQFL REKKFEQNIP RVVIDDAEKI AYEDAEKALR
101: RGILYMAALQ ADDGHWPAEN SGCMFFIAPF VICLYITGHL DKIFSQEHRK EMLRYMYNHQ NEDGGWGIHV ESHSFMFSTV LNYICLRIFG EEADHDGINS
201: ACAMARKWIL DHGGATYTPL LGKAWLSVLG VYDWSGCKPI PPEFWLLPYY SPINGGTVWI YLRDVFMGLS YLYGKKFVAT PTPLILQVRE EIYDQPYKEI
301: CWSQARNLCA KEDLYFPQSF AQDWFWNIVH MFSENIFNLW PFNKLIRHKA LQKTMEIIHY HDEATQYITG GAIPKPFHML ACWVEDPKSD YFKKHLARVP
401: GFLWIGEDGL KIQTFGSQIW DTAFLLQVML AADVNDEIRS TLIKGYSYLR KSQITENPPG DFIKMFRDIS KGGWSFSDKD QGWPVSDCIS ESLKCCLIFE
501: SMPSEFIGEK MDVERLYDAI NILLYLQGNN GGIAIWEPAP GKTWLEWLNP VEFVEESTVE HESLECTGSA IVALLQFMKQ FPDHRREEIE GFVTKGVKYI
601: EDLQMPNGSW YGNWGVCFIY GTFFAVRGLV AAGKTYHNCE TIRRAVRFLI ETQNIEGGWG ESYLSCPRKK YTPLDGNKTN VVNTGQAMMA LIMGGQMERD
701: PLPVHRAAKV LINSQLDNGD FPQQVNGLPI CRFLLS

Best Arabidopsis Sequence Match ( AT5G36150.1 )
(BLAST)

001: MWRLRIGAKA GDDPHLCTTN NFLGRQIWEF DANAGSPAEL SEVDQARQNF SNNRSQYKAC ADLLWRMQFL REKNFEQKIP RVRIEDAKKI TFEDAKNTLR
101: RGIHYMAALQ SDDGHWPSEN AGCIFFNAPF VICLYITGHL DKVFSEEHRK EMLRYMYNHQ NDDGGWGIDV ESHSFMFCTV INYICLRIFG VDPDHDGESA
201: CARARKWIID HGGATYTPLF GKAWLSVLGV YEWSGCKPIP PEFWFFPSYF PINGGTLWIY LRDTFMAMSY LYGKKFVAKP TPLILQLREE LYPQPYAEIV
301: WSQARSRCAK EDLYYPQSLV QDLFWKLVHM FSENILNRWP FNKLIREKAI RTAMELIHYH DEATRYITGG AVPKVFHMLA CWVEDPESDY FKKHLARVSH
401: FIWIAEDGLK IQTFGSQIWD TAFVLQVMLA ADVDDEIRPT LIKGYSYLRK SQFTENPPGD YINMFRDISK GGWGYSDKDQ GWPVSDCISE SLECCLIFES
501: MSSEFIGEKM EVERLYDAVN MLLYMQSRNG GISIWEAASG KKWLEWLSPI EFIEDTILEH EYLECTGSAI VVLARFMKQF PGHRTEEVKK FITKGVKYIE
601: SLQIADGSWY GNWGICFIYG TFFAVRGLVA AGNTYDNCEA IRRAVRFLLD IQNGEGGWGE SFLSCPNKNY IPLEGNKTDV VNTGQALMVL IMGGQMDRDP
701: LPVHRAAKVL INSQMDNGDF PQQEIRGVYK MNVMLNFPTF RNSFTLWALT HYTKAIRLLL

Arabidopsis Description

PEN3Tirucalladienol synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9LVY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.