Factsheet for VIT_09s0054g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01160.t01	Wine grape	extracellular	12.55	94.06
VIT_09s0054g01370.t01	Wine grape	cytosol	15.98	90.3
VIT_09s0054g01500.t01	Wine grape	cytosol	11.23	85.0
VIT_09s0054g01220.t01	Wine grape	cytosol	80.58	80.58
VIT_09s0054g01130.t01	Wine grape	cytosol	19.68	79.68
VIT_09s0054g01390.t01	Wine grape	cytosol	78.86	77.84
VIT_09s0054g01170.t01	Wine grape	cytosol	4.62	77.78
VIT_09s0054g01410.t01	Wine grape	cytosol	79.0	77.76
VIT_09s0054g01230.t01	Wine grape	cytosol	78.2	76.98
VIT_09s0054g01140.t01	Wine grape	extracellular	20.08	76.77
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	50.07	74.02
VIT_09s0054g01470.t01	Wine grape	cytosol	37.78	72.59
VIT_09s0054g01340.t01	Wine grape	cytosol	37.78	69.08
VIT_09s0054g01520.t01	Wine grape	cytosol	79.26	69.04
VIT_09s0054g01480.t01	Wine grape	cytosol	38.04	68.57
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	6.08	67.65
VIT_09s0054g01290.t01	Wine grape	cytosol	11.1	65.12
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	9.25	64.22
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.68	64.18
VIT_04s0008g03000.t01	Wine grape	cytosol	25.36	62.54
VIT_11s0065g00030.t01	Wine grape	cytosol	60.77	60.69
VIT_04s0008g02990.t01	Wine grape	cytosol	7.4	59.57
VIT_09s0054g01180.t01	Wine grape	cytosol	50.59	59.56
VIT_10s0003g03530.t01	Wine grape	cytosol	56.94	59.37
VIT_10s0003g03650.t01	Wine grape	cytosol	59.45	59.29
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	22.99	58.98
AT1G78500.2	Thale cress	cytosol	59.18	58.41
CDY49432	Canola	cytosol	56.01	58.32
CDY52589	Canola	cytosol	56.01	58.32
VIT_09s0054g01280.t01	Wine grape	cytosol	27.34	58.31
AT4G15340.1	Thale cress	mitochondrion	58.92	58.22
Bra039929.1-P	Field mustard	cytosol	55.75	58.05
VIT_09s0054g01120.t01	Wine grape	cytosol	54.43	57.87
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	21.0	57.82
VIT_09s0054g01550.t01	Wine grape	cytosol	57.86	57.78
VIT_10s0003g03520.t01	Wine grape	cytosol	57.33	57.64
VIT_09s0018g00630.t01	Wine grape	cytosol	57.6	57.52
VIT_10s0116g01060.t01	Wine grape	cytosol	6.74	57.3
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	19.68	56.87
AT4G15370.1	Thale cress	cytosol	56.94	56.79
AT5G36150.1	Thale cress	cytosol	56.94	56.71
CDY38925	Canola	cytosol, nucleus, plasma membrane	55.09	56.66
AT5G42600.1	Thale cress	cytosol	56.8	56.5
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	56.54	56.32
AT5G48010.2	Thale cress	cytosol	56.41	55.74
VIT_10s0003g03660.t01	Wine grape	cytosol	57.99	55.5
VIT_11s0065g00640.t01	Wine grape	cytosol	55.61	55.39
Bra035809.1-P	Field mustard	cytosol	42.67	55.21
CDY25392	Canola	cytosol	55.09	54.8
CDY25386	Canola	cytosol, plasma membrane, plastid	42.4	54.78
VIT_09s0054g01110.t01	Wine grape	cytosol	57.46	54.65
VIT_10s0003g03610.t01	Wine grape	cytosol	20.34	54.61
CDY29797	Canola	cytosol	54.82	54.53
VIT_09s0054g01200.t01	Wine grape	cytosol	7.27	54.46
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.89	54.41
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	36.2	54.26
AT3G29255.1	Thale cress	cytosol	50.46	54.11
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	8.06	53.98
VIT_04s0008g02980.t01	Wine grape	mitochondrion	10.96	53.21
Bra035810.1-P	Field mustard	cytosol, mitochondrion	9.78	52.86
VIT_10s0003g03570.t01	Wine grape	cytosol	9.91	52.08
TraesCS4A01G495100.1	Wheat	cytosol	50.99	50.99
TraesCS7D01G004000.1	Wheat	cytosol	50.46	50.33
TraesCS7A01G003500.1	Wheat	cytosol	50.07	49.93
EES13537	Sorghum	cytosol	49.8	49.48
VIT_10s0003g03540.t01	Wine grape	cytosol	14.53	49.33
CDX89541	Canola	cytosol	9.51	48.98
VIT_09s0054g01250.t01	Wine grape	cytosol	19.15	48.82
HORVU7Hr1G000400.1	Barley	cytosol, plastid	47.42	48.71
Zm00001d024337_P001	Maize	cytosol	46.1	48.27
Os08t0223900-00	Rice	cytosol	49.8	48.03
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	10.3	47.27
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.96	46.88
VIT_10s0003g03550.t01	Wine grape	extracellular	5.81	44.0
VIT_09s0054g01090.t01	Wine grape	cytosol	54.95	43.84

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100265044	wikigene:100265044	MapMan:9.1.4.3	ProteinID:CCB45034	ProteinID:CCB45034.1
UniProt:F6GYJ8	EMBL:FN594972	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866
EntrezGene:LOC100265044	wikigene:LOC100265044	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764
PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00015CA666	ArrayExpress:VIT_09s0054g01210	EnsemblPlantsGene:VIT_09s0054g01210	EnsemblPlants:VIT_09s0054g01210.t01
RefSeq:XP_002270755	RefSeq:XP_002270755.2	RefSeq:XP_010655249.1	RefSeq:XP_010655251.1	SEG:seg	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYJ8]

Coordinates

chr9:+:22112718..22118770

Molecular Weight (calculated)

87042.3 Da

IEP (calculated)

6.401

GRAVY (calculated)

-0.303

Length

757 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIYTTNN FVGRQIWEFD PDYGTTEERA EVEAARENFW KNRFQVKPSS DLLCRMQFLR EKNFKQTIPQ VKVGHGEEIT YETTTTAVRR
101: AAHFFSALQA SDGHWPAENS GPLFLLPPLV MCLYITGHLD TVFPGEYRKE ILRFIFCHQN EDGGWGFHVE GHSTMYCTVY NYICMRILGV GPDDGQGNAC
201: PRGRKWILDR GGATSIPTWG KAWLSVLGLY EWAGCNSMPP EFWMLPSFFP IHPAKLWCYT RMVYMPLSYL YGKRFVGPIT PLVLQLREEL FLQPYNEINW
301: KKVRHHCAQE DLYYPHSLIQ DLMRDGVDLF TEPFLTRWPF NKLREKALET TMKHIHYEDR NSGYITLACV EKVLCMFACW VEDPYGDSFK KHLARLPDYI
401: WIAEDGIKMQ AVGSQLWDSS LAIQALIACK LTDEIGPTLM KGHDFIKKSQ VRDNPSGDFR GMYRHISKGS WTFSVRDQHW QVSDCTAEGF KCCLLLSVMP
501: PEIVGEKIEP EWLYDSVNFM LSLQSKNGGL SAWEPAGTSK WLESLNPTEM FEDVFIEHEY VENTASAIDA LVLFKKLYPG HRKQEIEIFI KNAVQYIEEI
601: QMPDGSWYGN WGVCFTYGTW FALRGLAAAG KTYHNCLAVR KAADFLLKLQ LDDGGWGESY LSCSDKKYTP LEGNRSNLIQ TGWTLMGLLH SGQAERDPTP
701: LHRAAKLLIN SQMEDGDFPQ QEIVGASLKT CMIHYPTCRN IYPLWAIAEY RQLVPLP

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.