Factsheet for Bra039929.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49432	Canola	cytosol	95.74	95.74
CDY52589	Canola	cytosol	95.46	95.46
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	75.93	72.63
Bra035810.1-P	Field mustard	cytosol, mitochondrion	13.48	70.0
Bra035809.1-P	Field mustard	cytosol	55.57	69.06
KRH46975	Soybean	endoplasmic reticulum	59.42	56.69
KRH66677	Soybean	cytosol	10.59	56.62
KRH44692	Soybean	endoplasmic reticulum	58.73	56.04
VIT_09s0054g01210.t01	Wine grape	cytosol	58.05	55.75
Bra026038.1-P	Field mustard	cytosol	57.77	55.48
KRH66671	Soybean	cytosol	57.91	55.25
Bra035079.1-P	Field mustard	cytosol	57.77	54.9
Bra003630.1-P	Field mustard	cytosol	57.63	54.63
KRH66676	Soybean	cytosol	46.91	54.13
KRH10719	Soybean	cytosol	33.29	53.07
KRH11342	Soybean	cytosol	49.66	51.87
Bra013167.1-P	Field mustard	cytosol	48.97	46.41
TraesCS4A01G495100.1	Wheat	cytosol	47.18	45.31
TraesCS7A01G003500.1	Wheat	cytosol	47.18	45.19
TraesCS7D01G004000.1	Wheat	cytosol	47.18	45.19
EES13537	Sorghum	cytosol	46.49	44.36
Zm00001d024337_P001	Maize	cytosol	42.92	43.15
Os08t0223900-00	Rice	cytosol	46.22	42.8
HORVU7Hr1G000400.1	Barley	cytosol, plastid	43.19	42.61
Bra014952.1-P	Field mustard	cytosol	46.63	40.17

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	EnsemblPlantsGene:Bra039929	EnsemblPlants:Bra039929.1	EnsemblPlants:Bra039929.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	UniProt:M4FFQ5	PFAM:PF13243
PFAM:PF13249	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239
InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002542EEE	:	:

Description

AT1G78500 (E=0.0) | pentacyclic triterpene synthase, putative

Coordinates

chrA09:+:31783020..31787535

Molecular Weight (calculated)

83949.5 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.266

Length

727 amino acids

Sequence
(BLAST)

001: MWKLRIAAEA GDGPHLFSTN NYVGRQIWEF DANSGSPEER EEVDRARQNF SLNRSCFKAS ADLLWRMQFL REKKFKQKIP QVRIENAEEI TYEDARAALR
101: RGVLYFAALQ ADDGHWPAEN SGSMFFNAPF FISLYITGHL EKIFTPEHRK EFMRYLYNHQ NDDGGWGIHV EGHSVMFCTV LNYICLRIFG MDQESVCARA
201: RKWIIDHGGA AYTPLFGKIW LSVLGVYDWS GCKPMPPEFW MLPLSSPFNG GTVWIYLRDI FMAVSYLYGK KFVATPTPLI AQLREELYPQ PYSKIKWSQA
301: RNLCAKEDLY YPQSFLQDMF WKSVHVFSEN LLNQWPLNKL LRQKALRKTM EIIHYHDEST RYITGGCVQK PFHMLACWVD DPDGDYFKKH LARVSDFIWI
401: GEDGLKIQSF GSQLWDTALS LEVLLAADMD DEISSTLIKG YDFLKKSQLT ENPPGDHRKM FREITKGAWT FSDRDQGWAV SDCTAESLEC CLIFESMPML
501: GEKMDAEKLY DAVNLLLYFQ SKNGGLAVWE PARGNTWLEW LSPVEFAEDT VVELEYLECT GSAIVALVRF LEMFPGHRKE EVESFIRKGI KYIESFQMPD
601: GSWYGNWGVC FIFGTFNAVR GLVAAGKTYS NCDAIGRAVQ FLLDTQNAEG GWGESYLSCP IKMERDPSPV HRAAKVLINS QLENGDFPQQ EIMGVFKMNL
701: LLHYPTYRNI FTLWALTYYT KALRLRM

Best Arabidopsis Sequence Match ( AT1G78500.1 )
(BLAST)

001: MWRLKIGAKG GDETHLFTTN NYTGRQTWEF DADACSPEEL AEVDEARQNF SINRSRFKIS ADLLWRMQFL REKKFEQKIP RVEIGDAENI TYKDAKTALR
101: RGILYFKALQ AEDGHWPAEN SGCLFFEAPF VICLYITGHL EKILTLEHRK ELLRYMYNHQ NEDGGWGIHV EGQSAMFCTV INYICLRILG VEADLDDIKG
201: SGCARARKWI LDHGGATYTP LIGKAWLSIL GVYDWSGCKP IPPEVWMLPT FSPFNGGTLW IYFRDIFMGV SYLYGKKFVA TPTPLILQLR EELYPQPYDK
301: ILWSQARNQC AKEDLYYPQS FLQEMFWKCV HILSENILNR WPCNKLIRQK ALRTTMELLH YQDEASRYFT GGCVPKPFHM LACWVEDPDG DYFKKHLARV
401: PDYIWIGEDG LKIQSFGSQL WDTAFSLQVM LAYQDVDDDD DEIRSTLIKG YSFLNKSQLT QNPPGDHRKM LKDIAKGGWT FSDQDQGWPV SDCTAESLEC
501: CLVFGSMPSE LIGEKMDVER LYDAVNLLLY FQSKNGGITV WEAARGRTWL EWLSPVEFME DTIVEHEYVE CTGSAIVALA RFLKEFPEHR REEVEKFIKN
601: AVKYIESFQM PDGSWYGNWG VCFMYGTFFA VRGLVAAGKT YQNCEPIRKA VQFILETQNV EGGWGESYLS CPNKKYTLLE GNRTNVVNTG QALMVLIMGG
701: QMERDPLPVH RAAKVLINSQ LDNGDFPQEE IMGVFKMNVM VHYATYRNIF TLWALTYYTK ALRVPLC

Arabidopsis Description

PEN6Seco-amyrin synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9SYN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.