Factsheet for VIT_09s0054g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
extracellular 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08878	Canola	cytosol	50.49	27.57
VIT_04s0008g02980.t01	Wine grape	mitochondrion	34.65	22.44
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	57.43	22.14
VIT_09s0054g01470.t01	Wine grape	cytosol	80.2	20.56
VIT_09s0054g01340.t01	Wine grape	cytosol	77.23	18.84
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	11.88	17.65
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	80.2	15.82
CDY63677	Canola	cytosol	12.87	13.68
VIT_09s0054g01210.t01	Wine grape	cytosol	94.06	12.55
VIT_09s0054g01220.t01	Wine grape	cytosol	81.19	10.83
VIT_09s0054g01390.t01	Wine grape	cytosol	79.21	10.43
VIT_09s0054g01410.t01	Wine grape	cytosol	79.21	10.4
VIT_09s0054g01230.t01	Wine grape	cytosol	78.22	10.27
VIT_10s0003g03530.t01	Wine grape	cytosol	66.34	9.23
VIT_09s0054g01520.t01	Wine grape	cytosol	78.22	9.09
VIT_10s0003g03650.t01	Wine grape	cytosol	67.33	8.96
VIT_10s0003g03520.t01	Wine grape	cytosol	66.34	8.9
VIT_11s0065g00030.t01	Wine grape	cytosol	63.37	8.44
VIT_10s0003g03660.t01	Wine grape	cytosol	65.35	8.34
VIT_09s0054g01120.t01	Wine grape	cytosol	57.43	8.15
VIT_09s0054g01180.t01	Wine grape	cytosol	51.49	8.09
VIT_11s0065g00640.t01	Wine grape	cytosol	59.41	7.89
VIT_09s0054g01550.t01	Wine grape	cytosol	57.43	7.65
VIT_09s0018g00630.t01	Wine grape	cytosol	56.44	7.52
Zm00001d024337_P001	Maize	cytosol	52.48	7.33
HORVU7Hr1G000400.1	Barley	cytosol, plastid	53.47	7.33
VIT_09s0054g01110.t01	Wine grape	cytosol	56.44	7.16
TraesCS4A01G495100.1	Wheat	cytosol	53.47	7.13
TraesCS7D01G004000.1	Wheat	cytosol	53.47	7.11
TraesCS7A01G003500.1	Wheat	cytosol	53.47	7.11
EES13537	Sorghum	cytosol	53.47	7.09
Os08t0223900-00	Rice	cytosol	51.49	6.62
VIT_09s0054g01090.t01	Wine grape	cytosol	57.43	6.11
VIT_09s0054g01280.t01	Wine grape	cytosol	8.91	2.54
VIT_09s0054g01290.t01	Wine grape	cytosol	1.98	1.55
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	0.99	1.47
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	0.99	0.92
VIT_09s0054g01370.t01	Wine grape	cytosol	0.99	0.75
VIT_04s0008g03000.t01	Wine grape	cytosol	0.99	0.33
VIT_10s0003g03610.t01	Wine grape	cytosol	0.0	0.0
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	0.0	0.0
VIT_09s0054g01130.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01060.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	0.0	0.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	0.0	0.0
VIT_04s0008g02990.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	0.0	0.0
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	0.0	0.0
VIT_10s0003g03570.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	0.0	0.0
VIT_10s0003g03550.t01	Wine grape	extracellular	0.0	0.0
VIT_10s0003g03540.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01140.t01	Wine grape	extracellular	0.0	0.0
VIT_09s0054g01170.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01200.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01250.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01500.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01480.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_09s0054g01160	EMBL:FN594972	EnsemblPlants:VIT_09s0054g01160.t01	EnsemblPlantsGene:VIT_09s0054g01160	Gene3D:1.50.10.20	GO:GO:0003674
GO:GO:0003824	GO:GO:0016866	InterPro:SQ_cyclase_C	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF16	PFAM:PF13243	ProteinID:CBI18413	ProteinID:CBI18413.3	ScanProsite:PS01074	SignalP:SignalP-noTM
SUPFAM:SSF48239	TMHMM:TMhelix	UniParc:UPI00015CA65F	UniProt:D7SRY1	MapMan:35.1	:

Description

No Description!

Coordinates

chr9:+:22025588..22026467

Molecular Weight (calculated)

11287.3 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.292

Length

101 amino acids

Sequence
(BLAST)

001: MPDGSWYGNW GVCFTYGTWF ALRGLAAASK TYHNCLAVRK VVDFLLKLQL DDSGWGESYL SCSDKKYTPL EGNQSNLIQT GWTLMGLIHS GQAERDPTPL
101: H

Best Arabidopsis Sequence Match ( AT1G78960.1 )
(BLAST)

001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL

Arabidopsis Description

LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.