Factsheet for VIT_09s0054g01230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01390.t01	Wine grape	cytosol	91.94	92.18
VIT_09s0054g01470.t01	Wine grape	cytosol	46.68	91.12
VIT_09s0054g01370.t01	Wine grape	cytosol	15.73	90.3
VIT_09s0054g01410.t01	Wine grape	cytosol	89.73	89.73
VIT_09s0054g01220.t01	Wine grape	cytosol	88.17	89.56
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	58.91	88.48
VIT_09s0054g01500.t01	Wine grape	cytosol	11.44	88.0
VIT_09s0054g01340.t01	Wine grape	cytosol	46.42	86.23
VIT_09s0054g01520.t01	Wine grape	cytosol	92.59	81.93
VIT_09s0054g01160.t01	Wine grape	extracellular	10.27	78.22
VIT_09s0054g01210.t01	Wine grape	cytosol	76.98	78.2
PGSC0003DMT400048796	Potato	cytosol	76.85	77.66
VIT_09s0054g01480.t01	Wine grape	cytosol	42.0	76.9
PGSC0003DMT400043981	Potato	cytosol	60.86	76.72
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	6.76	76.47
PGSC0003DMT400051584	Potato	cytosol	74.64	75.43
PGSC0003DMT400048795	Potato	cytosol	71.78	75.31
VIT_09s0054g01140.t01	Wine grape	extracellular	19.25	74.75
VIT_09s0054g01130.t01	Wine grape	cytosol	17.82	73.26
VIT_09s0054g01280.t01	Wine grape	cytosol	30.82	66.76
VIT_09s0054g01290.t01	Wine grape	cytosol	11.05	65.89
VIT_04s0008g03000.t01	Wine grape	cytosol	26.01	65.15
Solyc12g035440.1.1	Tomato	cytosol	7.28	64.37
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.59	64.18
VIT_04s0008g02990.t01	Wine grape	cytosol	7.8	63.83
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	8.71	61.47
VIT_10s0003g03530.t01	Wine grape	cytosol	57.74	61.16
VIT_10s0003g03650.t01	Wine grape	cytosol	60.08	60.87
VIT_11s0065g00030.t01	Wine grape	cytosol	59.82	60.69
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	23.15	60.34
VIT_09s0054g01180.t01	Wine grape	cytosol	50.06	59.88
VIT_09s0054g01120.t01	Wine grape	cytosol	54.23	58.57
VIT_10s0003g03520.t01	Wine grape	cytosol	57.35	58.57
VIT_10s0116g01060.t01	Wine grape	cytosol	6.76	58.43
VIT_09s0018g00630.t01	Wine grape	cytosol	57.35	58.18
VIT_09s0054g01550.t01	Wine grape	cytosol	57.35	58.18
VIT_09s0054g01170.t01	Wine grape	cytosol	3.38	57.78
VIT_10s0003g03570.t01	Wine grape	cytosol	10.79	57.64
VIT_09s0054g01200.t01	Wine grape	cytosol	7.54	57.43
VIT_04s0008g02980.t01	Wine grape	mitochondrion	11.57	57.05
VIT_10s0003g03660.t01	Wine grape	cytosol	58.52	56.89
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	19.25	56.49
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	20.16	56.36
VIT_11s0065g00640.t01	Wine grape	cytosol	55.14	55.79
VIT_09s0054g01110.t01	Wine grape	cytosol	57.61	55.65
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.93	53.98
VIT_10s0003g03610.t01	Wine grape	cytosol	19.51	53.19
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	11.05	51.52
TraesCS4A01G495100.1	Wheat	cytosol	50.46	51.26
TraesCS7A01G003500.1	Wheat	cytosol	50.2	50.86
TraesCS7D01G004000.1	Wheat	cytosol	49.94	50.59
VIT_09s0054g01250.t01	Wine grape	cytosol	19.51	50.51
EES13537	Sorghum	cytosol	49.94	50.39
VIT_10s0003g03550.t01	Wine grape	extracellular	6.5	50.0
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.42	50.0
Os08t0223900-00	Rice	cytosol	50.46	49.43
HORVU7Hr1G000400.1	Barley	cytosol, plastid	46.94	48.98
Zm00001d024337_P001	Maize	cytosol	45.9	48.82
VIT_10s0003g03540.t01	Wine grape	cytosol	13.91	47.98
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.9	46.88
VIT_09s0054g01090.t01	Wine grape	cytosol	54.88	44.47

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100254746	wikigene:100254746	MapMan:9.1.4.3	EMBL:AM471846	ProteinID:CAN77299
ProteinID:CAN77299.1	ProteinID:CCB45032	ProteinID:CCB45032.1	UniProt:F6GYJ6	EMBL:FN594972	GO:GO:0003674
GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	EntrezGene:LOC100254746	wikigene:LOC100254746	PFAM:PF13243
PFAM:PF13249	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239
InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00015CA76F	ArrayExpress:VIT_09s0054g01230	EnsemblPlantsGene:VIT_09s0054g01230
EnsemblPlants:VIT_09s0054g01230.t01	unigene:Vvi.21204	RefSeq:XP_002271333	RefSeq:XP_002271333.1	RefSeq:XP_010655244.1	RefSeq:XP_010655245.1
RefSeq:XP_010655246.1	RefSeq:XP_019077722.1	SEG:seg	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYJ6]

Coordinates

chr9:-:22154680..22159973

Molecular Weight (calculated)

88102.6 Da

IEP (calculated)

5.952

GRAVY (calculated)

-0.303

Length

769 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIYSTNN FVGRQIWEFD PDYGTPEERA EVEAARENFW KNRFQVKPSS DLLWRMQFLR EKNFKQTIPQ VKVGDGEEIA EETATTAVRR
101: GAHFFSALQA SDGHWPAEHS GPLFFLPPLV MCLYITGHLD TVFPGEYRKE ILRYLYCHQN EDGGWGLHIE EHSIMFCTTL SYVCMRILGE GRDGGRDNAC
201: ARGRKWILNR GGVTSIPTWG KIWLSIFGLF DWSGSNPMPP EFSLFPSHLP MNPAKIWCYS RLIFMPMSYL YGKRFVGPIT PLVLELREEL FLQPYNEINW
301: KKVRHLCAKE DLYYPHPLIQ DMMWDSLYIC TEPLLTRWPF NKLRKKALEV TMKHIHYEDE NSRYITIGCV EKVLCMLSCW VEDPNGDYFK KHLARIPDYI
401: WVGEDGIKMQ TFGSQEWDTS LALQALLACN MTNEIGPTLK KGHEFLKESQ VKDNPSGDFK SMYRHISKGS WTFSDKDHGW QVSDCTAEGL KCCLLFSMMA
501: PEIVGMKIEP GRLFDSVNIL LSLQSENGGI VGWEPAGASE WLELLNPSEM FEDLVIEHEY VECTASAIQA LVLFKKLYPE HRTEEIDNFI TNATKYIEDQ
601: QMPDGSWYGK WGVCFIYSSW WALGGLAAAG KTYHNCLAIG RAVEFLLKSQ RDDGGWGESY ISCRDKKYTP LEGNKSNLVQ TGWALMGLLS SGQAERDPTP
701: LHRAAKLLIN SQMEDGDFPQ QEITGAFMNN CMLHCADYRN IFPLWALAEY VSGCHCLKAG CIAMPLKHL

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.