Factsheet for VIT_09s0054g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01500.t01	Wine grape	cytosol	40.11	75.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	20.32	56.72
VIT_09s0054g01370.t01	Wine grape	cytosol	36.36	50.75
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	23.53	38.94
VIT_09s0054g01290.t01	Wine grape	cytosol	26.74	38.76
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	55.08	37.45
VIT_10s0003g03610.t01	Wine grape	cytosol	54.55	36.17
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	31.55	35.76
VIT_09s0054g01480.t01	Wine grape	cytosol	75.4	33.57
VIT_04s0008g03000.t01	Wine grape	cytosol	51.87	31.6
VIT_10s0003g03540.t01	Wine grape	cytosol	34.22	28.7
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	8.02	23.44
VIT_09s0054g01210.t01	Wine grape	cytosol	79.68	19.68
VIT_09s0054g01220.t01	Wine grape	cytosol	75.94	18.76
VIT_09s0054g01390.t01	Wine grape	cytosol	75.94	18.51
VIT_09s0054g01230.t01	Wine grape	cytosol	73.26	17.82
VIT_09s0054g01410.t01	Wine grape	cytosol	72.73	17.69
VIT_09s0054g01520.t01	Wine grape	cytosol	74.87	16.11
VIT_09s0054g01180.t01	Wine grape	cytosol	54.55	15.86
VIT_09s0054g01550.t01	Wine grape	cytosol	61.5	15.17
VIT_09s0018g00630.t01	Wine grape	cytosol	59.89	14.78
VIT_10s0003g03530.t01	Wine grape	cytosol	56.15	14.46
VIT_09s0054g01120.t01	Wine grape	cytosol	54.55	14.33
VIT_09s0054g01110.t01	Wine grape	cytosol	58.82	13.82
VIT_11s0065g00030.t01	Wine grape	cytosol	54.55	13.46
VIT_10s0003g03650.t01	Wine grape	cytosol	54.55	13.44
VIT_10s0003g03520.t01	Wine grape	cytosol	54.01	13.41
VIT_10s0003g03660.t01	Wine grape	cytosol	55.08	13.02
VIT_11s0065g00640.t01	Wine grape	cytosol	49.73	12.24
Zm00001d024337_P001	Maize	cytosol	45.99	11.89
TraesCS4A01G495100.1	Wheat	cytosol	47.06	11.62
EES13537	Sorghum	cytosol	46.52	11.42
TraesCS7A01G003500.1	Wheat	cytosol	45.99	11.33
TraesCS7D01G004000.1	Wheat	cytosol	45.45	11.2
Os08t0223900-00	Rice	cytosol	46.52	11.08
VIT_09s0054g01090.t01	Wine grape	cytosol	49.2	9.69
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	14.44	9.15
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	3.21	8.82
HORVU7Hr1G000400.1	Barley	cytosol, plastid	32.09	8.14
VIT_10s0003g03550.t01	Wine grape	extracellular	4.28	8.0
VIT_04s0008g02980.t01	Wine grape	mitochondrion	5.35	6.41
CDY08878	Canola	cytosol	5.88	5.95
VIT_09s0054g01340.t01	Wine grape	cytosol	10.7	4.83
VIT_09s0054g01250.t01	Wine grape	cytosol	4.81	3.03
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	1.6	2.75
VIT_10s0116g01060.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	0.0	0.0
VIT_10s0003g03570.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.0	0.0
VIT_09s0054g01280.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01200.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01170.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01160.t01	Wine grape	extracellular	0.0	0.0
VIT_09s0054g01140.t01	Wine grape	extracellular	0.0	0.0
VIT_04s0008g02990.t01	Wine grape	cytosol	0.0	0.0
CDY63677	Canola	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_09s0054g01130	EMBL:FN594972	EnsemblPlants:VIT_09s0054g01130.t01	EnsemblPlantsGene:VIT_09s0054g01130	Gene3D:1.50.10.20	InterPro:Terpenoid_cyclase/PrenylTrfase
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	ProteinID:CCB45037	ProteinID:CCB45037.1	SUPFAM:SSF48239	UniParc:UPI000210951E
UniProt:F6GYK1	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr9:+:22010107..22017455

Molecular Weight (calculated)

21556.6 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.345

Length

187 amino acids

Sequence
(BLAST)

001: MWRLKIADGG NDPYIFSTNN FVGRQIWEFD PDYGTPKERA KVEAARENFW KNQFRVKPSS DLLCIRYKAS DGHWPAENAG PLFLLPPLVI YLYITRHLDP
101: IFLGEYRKEI LCFIYCHQNE DGEWGFHVEG HNTKYCTVFN YICMSIIREG SDGGQGNACL RGQKWILDHG GATSIPSWGI LGLFEWA

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.