Factsheet for VIT_10s0116g01050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	15.27	58.82
VIT_09s0054g01160.t01	Wine grape	extracellular	22.14	57.43
VIT_09s0054g01170.t01	Wine grape	cytosol	9.16	53.33
VIT_04s0008g02980.t01	Wine grape	mitochondrion	23.66	39.74
VIT_09s0054g01470.t01	Wine grape	cytosol	57.63	38.32
VIT_09s0054g01340.t01	Wine grape	cytosol	57.25	36.23
VIT_04s0008g02990.t01	Wine grape	cytosol	12.98	36.17
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	14.12	33.95
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	56.11	28.71
KRH13217	Soybean	cytosol	59.16	24.84
VIT_09s0054g01180.t01	Wine grape	cytosol	59.16	24.11
KRH74136	Soybean	cytosol	69.08	23.6
VIT_11s0065g00640.t01	Wine grape	cytosol	66.79	23.03
AT3G45130.2	Thale cress	cytosol	66.79	22.91
VIT_09s0018g00630.t01	Wine grape	cytosol	65.27	22.56
VIT_09s0054g01550.t01	Wine grape	cytosol	64.12	22.16
Solyc05g047580.2.1	Tomato	cytosol	61.83	22.16
VIT_09s0054g01110.t01	Wine grape	cytosol	66.03	21.73
VIT_11s0065g00030.t01	Wine grape	cytosol	62.21	21.5
VIT_09s0054g01120.t01	Wine grape	cytosol	58.4	21.49
VIT_09s0054g01220.t01	Wine grape	cytosol	59.16	20.48
VIT_09s0054g01210.t01	Wine grape	cytosol	56.87	19.68
VIT_09s0054g01390.t01	Wine grape	cytosol	57.25	19.56
VIT_09s0054g01230.t01	Wine grape	cytosol	56.49	19.25
VIT_09s0054g01410.t01	Wine grape	cytosol	55.34	18.86
VIT_09s0054g01090.t01	Wine grape	cytosol	66.41	18.34
VIT_10s0003g03650.t01	Wine grape	cytosol	52.29	18.05
VIT_10s0003g03530.t01	Wine grape	cytosol	47.71	17.22
VIT_09s0054g01520.t01	Wine grape	cytosol	56.11	16.92
VIT_09s0054g01280.t01	Wine grape	cytosol	22.14	16.34
VIT_10s0003g03520.t01	Wine grape	cytosol	46.95	16.33
VIT_10s0003g03660.t01	Wine grape	cytosol	48.09	15.93
VIT_09s0054g01140.t01	Wine grape	extracellular	11.07	14.65
VIT_09s0054g01250.t01	Wine grape	cytosol	13.36	11.78
VIT_09s0054g01200.t01	Wine grape	cytosol	3.44	8.91
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	1.91	7.35
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	5.73	5.08
VIT_10s0003g03570.t01	Wine grape	cytosol	2.67	4.86
VIT_10s0003g03550.t01	Wine grape	extracellular	1.53	4.0
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	0.76	3.12
VIT_09s0054g01290.t01	Wine grape	cytosol	1.53	3.1
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	1.15	1.09
VIT_09s0054g01370.t01	Wine grape	cytosol	0.38	0.75
VIT_09s0054g01480.t01	Wine grape	cytosol	0.76	0.48
VIT_04s0008g03000.t01	Wine grape	cytosol	0.38	0.33
VIT_10s0003g03540.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	0.0	0.0
VIT_09s0054g01500.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0003g03610.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01060.t01	Wine grape	cytosol	0.0	0.0
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	0.0	0.0
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	0.0	0.0
VIT_09s0054g01130.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	ProteinID:CCB43964	ProteinID:CCB43964.1	UniProt:F6GVI0	EMBL:FN594953
GO:GO:0003674	GO:GO:0003824	PFAM:PF00432	PFAM:PF13243	InterPro:PFTB_repeat	PANTHER:PTHR11764
PANTHER:PTHR11764:SF36	InterPro:SQ_cyclase_C	SUPFAM:SSF48239	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000210AC3A	ArrayExpress:VIT_10s0116g01050
EnsemblPlantsGene:VIT_10s0116g01050	EnsemblPlants:VIT_10s0116g01050.t01	:	:	:	:

Description

No Description!

Coordinates

chr10_random:-:514921..517692

Molecular Weight (calculated)

29652.4 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.231

Length

262 amino acids

Sequence
(BLAST)

001: MLKKAHDFIK NTQVRSNSLG NFNLWYHHIS KGGWPFSTLD NGWPVSDCTV EGLKMSSNMV GEAIVVDQLF DAVNFILSLQ NSNGGFASYE LTRSYAWLEV
101: CRMYGSWGVC YTYGTWFGVK GLLAGGRTYQ NCSSIRRACD FLLSKQLHSG GWGESYRSCK DKVYTNLEGN KSHLVHTRWA MLALIRAGQV GQEERDPTPL
201: HRATKLLINS QMEDGDFPQQ DIIGVLKNNC MISYSAYRNI FPIWALAEYL NHVILLSRSH SL

Best Arabidopsis Sequence Match ( AT3G45130.1 )
(BLAST)

001: MWRLKLSEGD EESVNQHVGR QFWEYDNQFG TSEERHHINH LRSNFTLNRF SSKHSSDLLY RFQCWKEKGK GMERLPQVKV KEGEERLINE EVVNVTLRRS
101: LRFYSILQSQ DGFWPGDYGG PLFLLPALVI GLYVTEVLDG TLTAQHQIEI RRYLYNHQNK DGGWGLHVEG NSTMFCTVLS YVALRLMGEE LDGGDGAMES
201: ARSWIHHHGG ATFIPSWGKF WLSVLGAYEW SGNNPLPPEL WLLPYSLPFH PGRMWCHCRM VYLPMSYLYG RRFVCRTNGT ILSLRRELYT IPYHHIDWDT
301: ARNQCAKEDL YYPHPKIQDV LWSCLNKFGE PLLERWPLNN LRNHALQTVM QHIHYEDQNS HYICIGPVNK VLNMLCCWVE SSNSEAFKSH LSRIKDYLWV
401: AEDGMKMQGY NGSQLWDVTL AVQAILATNL VDDYGLMLKK AHNYIKNTQI RKDTSGDPGL WYRHPCKGGW GFSTGDNPWP VSDCTAEALK AALLLSQMPV
501: NLVGEPMPEE HLVDAVNFIL SLQNKNGGFA SYELTRSYPE LEVINPSETF GDIIIDYQYV ECTSAAIQGL VLFTTLNSSY KRKEIVGSIN KAVEFIEKTQ
601: LPDGSWYGSW GVCFTYATWF GIKGMLASGK TYESSLCIRK ACGFLLSKQL CCGGWGESYL SCQNKVYTNL PGNKSHIVNT SWALLALIEA GQASRDPMPL
701: HRGAKSLINS QMEDGDYPQQ EILGVFNRNC MISYSAYRNI FPIWALGEYR KLMLSL

Arabidopsis Description

LAS1Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.