Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01060.t01 | Wine grape | cytosol | 9.71 | 79.78 |
| AT3G45130.2 | Thale cress | cytosol | 66.76 | 63.87 |
| KRH74136 | Soybean | cytosol | 66.89 | 63.75 |
| VIT_10s0116g01050.t01 | Wine grape | cytosol, nucleus, peroxisome | 22.16 | 61.83 |
| Solyc04g070980.2.1 | Tomato | plastid | 62.93 | 60.53 |
| KRH13217 | Soybean | cytosol | 49.79 | 58.33 |
| VIT_10s0116g01070.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 12.45 | 55.15 |
| Solyc04g050670.1.1 | Tomato | cytosol | 12.18 | 54.94 |
| Solyc12g006530.1.1 | Tomato | cytosol | 56.09 | 53.88 |
| Solyc07g042630.2.1 | Tomato | cytosol | 55.27 | 53.44 |
| Solyc12g006520.1.1 | Tomato | cytosol | 49.93 | 52.29 |
| Solyc12g006510.1.1 | Tomato | cytosol | 52.26 | 50.66 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 11.76 | 50.0 |
| Solyc12g035440.1.1 | Tomato | cytosol | 5.34 | 44.83 |
| Solyc12g035460.1.1 | Tomato | cytosol | 12.18 | 39.56 |
Protein Annotations
| EnsemblPlants:Solyc05g047580.2.1 | EnsemblPlantsGene:Solyc05g047580.2 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| GO:GO:0016866 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| PANTHER:PTHR11764 | PANTHER:PTHR11764:SF36 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg |
| SUPFAM:SSF48239 | TIGRFAMs:TIGR01787 | UniParc:UPI0002766C9D | UniProt:K4C0Z1 | MapMan:9.1.4.3 | : |
Description
Lanosterol synthase [Source:Projected from Arabidopsis thaliana (AT3G45130) UniProtKB/Swiss-Prot;Acc:Q1G1A4]
Coordinates
chr5:-:59040928..59051483
Molecular Weight (calculated)
84254.8 Da
IEP (calculated)
6.698
GRAVY (calculated)
-0.343
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKLSEGD DPWIRSLNNN VGRQYWEFDQ NSGTDEERSH VEDIREHFSM NRFHVKHSSD LLLRLQFAKG KQIEMLEKVK IESEEELVKT TLKMGLRFYS
101: TIQADDGHWP ADYGGPLFLL PGLVISLFIM EAMNVVLSEE HQKEILRYLY NHQNKDGGWG LHIEGHSTMF CTALNYVAIR LINGENNVNN EAMEKARKWI
201: IEHGGVTYIP SWGKFWLSVL GVYEWSGNNP LPPELWLLPY FVPVHPGRMW CHCRMVYLAM SYLYGRRYVG PINSNILSLR RELYTTPYHH IDWDLARNQC
301: AKEDLYYPHP LVQDILWEGL HKIGEPLLMQ WPLSKLRKKA LNTVMEHIHY EDENTNYICI GPVNKVLNML CCWVEDPDSQ AIKLHLSRIK DYLWLAEDGM
401: KMKGYNGSQL WDVSFGVQAI LATNLPQEYG VMLKNAHHFI KASQARENSN GDAKKWYRQH SRGGWPFSTV DNGWIVSDCT AEALKASILL SLMPLDIVGE
501: VTAPHRLFEA VDLILSLQNS NGGFASYELT RSYAWLEMIN PSETFGDITI DYQYVECTSA VIQALESFKK NYPKHREKEI EACINKALQF IQTIQLPDGS
601: WYGSWGVCYT YGTWFGICGL VAGGYTYENC KSIRKACNFL LSKQLQSSGG WGESYLSSQH KGKRDPTPLK RAAKILVNSQ MDNGDFPQQE IIGVFNRNCM
701: ISYSSYRNIF PIWALGAYLN EVLLSSKEYH E
101: TIQADDGHWP ADYGGPLFLL PGLVISLFIM EAMNVVLSEE HQKEILRYLY NHQNKDGGWG LHIEGHSTMF CTALNYVAIR LINGENNVNN EAMEKARKWI
201: IEHGGVTYIP SWGKFWLSVL GVYEWSGNNP LPPELWLLPY FVPVHPGRMW CHCRMVYLAM SYLYGRRYVG PINSNILSLR RELYTTPYHH IDWDLARNQC
301: AKEDLYYPHP LVQDILWEGL HKIGEPLLMQ WPLSKLRKKA LNTVMEHIHY EDENTNYICI GPVNKVLNML CCWVEDPDSQ AIKLHLSRIK DYLWLAEDGM
401: KMKGYNGSQL WDVSFGVQAI LATNLPQEYG VMLKNAHHFI KASQARENSN GDAKKWYRQH SRGGWPFSTV DNGWIVSDCT AEALKASILL SLMPLDIVGE
501: VTAPHRLFEA VDLILSLQNS NGGFASYELT RSYAWLEMIN PSETFGDITI DYQYVECTSA VIQALESFKK NYPKHREKEI EACINKALQF IQTIQLPDGS
601: WYGSWGVCYT YGTWFGICGL VAGGYTYENC KSIRKACNFL LSKQLQSSGG WGESYLSSQH KGKRDPTPLK RAAKILVNSQ MDNGDFPQQE IIGVFNRNCM
701: ISYSSYRNIF PIWALGAYLN EVLLSSKEYH E
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.