Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01060.t01 | Wine grape | cytosol | 10.1 | 70.79 |
| KRH74136 | Soybean | cytosol | 79.33 | 64.54 |
| VIT_10s0116g01050.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.84 | 59.16 |
| KRH74134 | Soybean | endoplasmic reticulum | 63.14 | 52.05 |
| KRH66676 | Soybean | cytosol | 52.4 | 51.9 |
| KRH10719 | Soybean | cytosol | 37.66 | 51.54 |
| AT3G45130.2 | Thale cress | cytosol | 61.38 | 50.13 |
| Solyc05g047580.2.1 | Tomato | cytosol | 58.33 | 49.79 |
| KRH11342 | Soybean | cytosol | 51.92 | 46.55 |
| KRG92127 | Soybean | cytosol | 56.25 | 45.82 |
| KRH41389 | Soybean | cytosol | 54.97 | 44.95 |
| KRH44692 | Soybean | endoplasmic reticulum | 53.21 | 43.57 |
| KRH46975 | Soybean | endoplasmic reticulum | 52.4 | 42.91 |
| KRH66671 | Soybean | cytosol | 51.92 | 42.52 |
| VIT_10s0116g01070.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 10.74 | 40.61 |
| KRH66677 | Soybean | cytosol | 0.8 | 3.68 |
| KRH38081 | Soybean | cytosol | 0.32 | 2.7 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A0R0G4T9 | EMBL:ACUP02009671 | EnsemblPlantsGene:GLYMA_15G223600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016853 | GO:GO:0016866 | EnsemblPlants:KRH13217 | ProteinID:KRH13217 | ProteinID:KRH13217.1 |
| PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF36 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0006ED6BBE | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:40694344..40709542
Molecular Weight (calculated)
71060.3 Da
IEP (calculated)
6.930
GRAVY (calculated)
-0.202
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGVKRANDV VEFEEVRVIG LSVIGALNEI LTPEHQSEIR RYLFNHQNED GGWGMHIEGS SIMFTSALNY VTLRLLGEDI NGGEGAIQKA RTWILDHGGA
101: TYIPSWGKLW LSVLGVYEWS GMKPIPPEIW LFPYFVPLSR IWSHARQVYL PMSYLYGKRF IGPINALVLS LRRELYTLPY NLLDWNQAKN SCAKEDMSHP
201: SSMIQNILWD SFHSIGEPLL MHWPFSKLRQ KALCHVMEHI HYEDENTNYI CLAPISKVLN MVCCWLENPN SQTFKRHIPR IKDYLWVAED GMKMQAYGGS
301: QLWDTVFSIQ AILATNLKDE YGSMLKKANN FIKCSQITTN SSGTPSDWYR HISKGGWTFN CRQWLASAAI LLSNMSFDIV DRAMEVEQLY DGVNWILSMQ
401: NKNGGFAGFE LTRSYAWLEK LNPTETFEDV MIDRQFVECT TSAIGGLALF TQRYPGHRKK EIEICIAKAA NYIESMQLAD GSWYGSWGVC YTYGTWFGIK
501: GLIVAGKSYQ DSQSIRRGCE FLLSKQQLCG GWGESYITCQ TMVYTNLEGN KSNVVNTAWA MLALIEAGQA ERDPAPLHHA AKVLIDSQLE NGEFPQQAPS
601: AYRNIFPIWA LGEYRSRVLL CPSK
101: TYIPSWGKLW LSVLGVYEWS GMKPIPPEIW LFPYFVPLSR IWSHARQVYL PMSYLYGKRF IGPINALVLS LRRELYTLPY NLLDWNQAKN SCAKEDMSHP
201: SSMIQNILWD SFHSIGEPLL MHWPFSKLRQ KALCHVMEHI HYEDENTNYI CLAPISKVLN MVCCWLENPN SQTFKRHIPR IKDYLWVAED GMKMQAYGGS
301: QLWDTVFSIQ AILATNLKDE YGSMLKKANN FIKCSQITTN SSGTPSDWYR HISKGGWTFN CRQWLASAAI LLSNMSFDIV DRAMEVEQLY DGVNWILSMQ
401: NKNGGFAGFE LTRSYAWLEK LNPTETFEDV MIDRQFVECT TSAIGGLALF TQRYPGHRKK EIEICIAKAA NYIESMQLAD GSWYGSWGVC YTYGTWFGIK
501: GLIVAGKSYQ DSQSIRRGCE FLLSKQQLCG GWGESYITCQ TMVYTNLEGN KSNVVNTAWA MLALIEAGQA ERDPAPLHHA AKVLIDSQLE NGEFPQQAPS
601: AYRNIFPIWA LGEYRSRVLL CPSK
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.